Mesoterricola sediminis: METESE_11760
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Entry
METESE_11760 CDS
T09356
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
msea
Mesoterricola sediminis
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msea03032
]
METESE_11760 (hupB)
03036 Chromosome and associated proteins [BR:
msea03036
]
METESE_11760 (hupB)
03400 DNA repair and recombination proteins [BR:
msea03400
]
METESE_11760 (hupB)
DNA replication proteins [BR:
msea03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
METESE_11760 (hupB)
Chromosome and associated proteins [BR:
msea03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
METESE_11760 (hupB)
DNA repair and recombination proteins [BR:
msea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
METESE_11760 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Arteri_nsp7a
Motif
Other DBs
NCBI-ProteinID:
BDU76218
UniProt:
A0AA48HDE9
LinkDB
All DBs
Position
complement(1418085..1418381)
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AA seq
98 aa
AA seq
DB search
MNKAELISAVAEKADINKSKAAAALDTIIASVSAALRAGDKVTLVGFGTFSVATRGPRTG
RNPRDGAKIKIAAKKVAKFKPGKKLADDVNGKGGKKKK
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggctgaactgatcagcgccgtcgccgagaaggccgacatcaacaagtccaag
gccgccgccgccctggacaccatcatcgccagcgtctccgccgccctgcgcgccggcgac
aaggtcaccctggtgggcttcggcaccttctccgtcgccacccgcggcccccgcaccggc
cgcaacccccgcgacggcgcgaagatcaagatcgccgccaagaaggtcgccaagttcaag
cccggcaagaagcttgctgacgacgtgaacggcaagggcggcaagaagaagaagtag
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