KEGG   Mesoterricola sediminis: METESE_14970
Entry
METESE_14970      CDS       T09356                                 
Symbol
nrdJ
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
msea  Mesoterricola sediminis
Pathway
msea00230  Purine metabolism
msea00240  Pyrimidine metabolism
msea01100  Metabolic pathways
msea01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:msea00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    METESE_14970 (nrdJ)
   00240 Pyrimidine metabolism
    METESE_14970 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msea03400]
    METESE_14970 (nrdJ)
Enzymes [BR:msea01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     METESE_14970 (nrdJ)
DNA repair and recombination proteins [BR:msea03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    METESE_14970 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: BDU76539
UniProt: A0AA48GRZ8
LinkDB
Position
complement(1728589..1731981)
AA seq 1130 aa
MQIFRAFTKAGQDPLAGIPFVARTSRITKLDGKVVFEAKDVMVPESWSQVAVDILAQKYF
RRKGVDAAGGGEKDARQVFHRLAGCWRHWGEAHGYFDGPDDAQAFYDELVYMLANQMCAP
NSPQWFNTGLHFAYGIAGPAQGHSYVDPATGEMHQSTSAYERPQPHACFIQSVEDDLVNP
GGIMDLWTREARIFKYGSGTGTNFSKVRGAMENLSGGGASSGLMSFLAVGDRAAGAIKSG
GTTRRAAKMVCLDLDHPDIEAFVDWKVTEERKVAMMAAGSLVLGRHWNAMCEAVEGSTTR
DANPRSNDKLRKAVAKAKAEGVASAFLAQCLSRLAQGDFDRDLKSYDTAWDGDGYATVGG
MNSNNSVRIPDQFMRSVEKDGDWYLERRTDGKVHKTLKARELWNKINFAAWACADPGVQY
DTTINDWHTCPADGPINASNPCSEYMFLDDTACNLASLNLCAFLTPDGGFDLAGYRHAIR
IWTVVLEISVLMAQFPSERIAQLSYDFRTLGLGYANLGAMLMRLGIPYDSEAGTQWCAAL
TAILTGDAYAASAEMAGELGPFPGYARNREHMLRVIRNHRRAAYDAPDAEYEGLSIRPQG
LKGGLIPRSILEASRESWDRALALGEAHGFRNAQVTVLAPTGTIGLLMDCDTTGVEPDFA
LVKFKKLAGGGYFKLVNRAIPEALARLGYTSTQIRDIERHVVGWTEITDETPGIALSQFL
AKGWTREELKAIEEKLPTAFDPSYVIDGERLRKDFGDEASAAFLDALAGSMTVEGAPHLR
EEHLPIFDCANKCGRKGQRYIAPMGHIRMMGAAQPFLSGAISKTINLPAEATVEDVAEIY
RASWKMMLKAVALYRDGSKMSQAIATNLDLLEGVDTLVDDEAPKTEKVQALSQALANQIV
RTYRKKLPNRRGGYTQAATIGGTKLYLRTGEYEDGTLGEIFLDIHKEGAGFRAVLNCFAI
AVSMGLQHGVPLEEFCDAFLFTRFEPNGMVQGSDTVKFSTSLIDFVFRELAISYLGRFEL
AQVEPEQLMQLNGPRKPESQAQALAAAIGGMVPLFPESETSGAGEIAPAPALAGHAHGHA
SARPVATSAFESARQKGYTGDPCPECGHLTLVRNGACLKCQTCGATTGCS
NT seq 3393 nt   +upstreamnt  +downstreamnt
atgcagattttccgcgcattcaccaaggccgggcaggaccccctggcggggatccccttc
gtggcccggaccagccgaatcaccaagctggacggcaaggtggtgttcgaggcgaaggat
gtgatggtccccgagagctggtcccaggtggccgtggacatcctcgcccagaagtacttc
cgccggaagggcgtggacgccgccggcggcggggagaaggacgcccgccaggtcttccac
cggctggccgggtgctggcgccactggggcgaggcccacggctacttcgacggccctgac
gacgcccaggccttctacgacgagctcgtctacatgctggccaaccagatgtgcgcgccc
aacagcccgcagtggttcaacaccggcctgcacttcgcctacggcatcgccggcccggcc
cagggccacagctacgtggaccccgcgaccggcgagatgcaccagtccacctcggcctac
gagcgcccccagccccacgcctgcttcatccagagcgtcgaggacgacctcgtcaacccc
ggcgggatcatggacctctggacccgcgaggcccggatcttcaagtacggcagcggcacc
ggcaccaacttctccaaggtgcggggcgccatggagaacctctccggcggcggcgcctcc
tcgggcctgatgtccttcctggccgtgggcgaccgcgccgccggcgccatcaagagcggc
ggcaccacccgcagggccgccaagatggtgtgcctggacctggaccaccccgacatcgag
gccttcgtcgactggaaggtcacggaggagcgcaaggtcgccatgatggccgccggcagc
ctcgtcctgggccgccactggaacgccatgtgcgaggccgtcgagggctccaccacccgg
gacgccaacccccgcagcaacgacaagctccgcaaggcggtcgccaaggccaaggccgag
ggcgtcgcctccgccttcctggcccagtgcctgagccggctggcccagggcgacttcgac
cgggacctcaagtcctacgacaccgcctgggacggcgacggctacgcgaccgtgggcggc
atgaactccaacaactcggtccgcatccccgaccagttcatgcgctcggtggagaaggac
ggcgactggtacctggagcgccgcaccgacggcaaggtccacaagaccctcaaggcccgg
gagctctggaacaagatcaacttcgccgcctgggcctgcgccgatcccggcgtccagtac
gacaccacgatcaacgactggcacacctgccccgccgacggccccatcaacgcgagcaac
ccctgctccgaatacatgttcctggacgacaccgcctgcaacctggcgtccctgaacctc
tgcgccttcctcacccccgacggcggcttcgacctggccggctaccggcacgccatccgc
atctggaccgtggtgctcgagatctcggtgctcatggcccagttcccctccgagcgcatc
gcccagctcagctacgacttccgcaccctgggcctgggctacgccaacctgggcgccatg
ctgatgcgcctgggcatcccctacgacagcgaggccggcacccagtggtgcgcggccctg
accgccatcctcaccggcgacgcctacgccgccagcgccgagatggccggcgagctcgga
cccttccccggctacgcccgcaaccgggagcacatgctccgggtgatccggaaccaccgc
cgcgccgcctacgacgcccccgacgccgagtacgagggcctgagcatccggccccagggc
ctcaagggcggcctcatcccccgctccatcctcgaggcgtcccgggagagctgggaccgc
gccctcgcgctgggcgaggcccacggcttccgcaacgcccaggtgacggtgctcgccccc
acggggaccatcggcctcctcatggactgcgacaccacgggcgtcgagcccgacttcgcc
ctcgtgaagttcaagaagctggccggcggcggctacttcaagctcgtcaaccgcgccatc
cccgaggccctggcccgcctgggctacacctccacccagatccgcgacatcgagcggcac
gtggtgggctggacggagatcaccgacgagacccccggcatcgcgctctcccagttcctg
gccaagggctggacccgcgaggagctgaaggccatcgaggagaagctcccgaccgccttc
gacccctcgtacgtcatcgacggggagcggctccggaaggacttcggggacgaggcctcg
gccgcgttcctggacgccctggccgggtccatgaccgtcgagggcgccccccacctccgc
gaggagcacctgcccatcttcgactgcgccaacaagtgcggccgcaagggccagcgctac
atcgcccccatgggccacatccgcatgatgggggccgcccagcccttcctcagcggcgcc
atcagcaagaccatcaacctcccggccgaggccaccgtcgaggacgtggcggagatctac
cgcgcctcctggaagatgatgctcaaggccgtggccctctaccgcgacggcagcaagatg
agccaggccatcgccacgaacctggacctgctcgagggcgtggacacgctggtggacgac
gaggccccgaagacggagaaggtccaggccctcagccaggctctcgccaaccagatcgtc
cgaacctaccgcaagaagctccccaaccgccgcggcggctacacccaggcggccaccatc
ggcggcaccaagctctacctccggaccggcgagtacgaggacggcaccctgggcgagatc
ttcctggacatccacaaggagggcgccggcttccgggccgtgctcaactgcttcgccatc
gccgtctccatgggcctgcagcacggggtgcccctggaggagttctgcgacgcgttcctc
ttcacccgcttcgagcccaacggcatggtccagggcagcgacacggtgaagttctccacc
agcctcatcgacttcgtgttccgggagctggccatcagctacctgggccgcttcgagctg
gcccaggtggagccggagcagctcatgcagctgaacggcccccgcaagcccgagagccag
gcccaggccctggccgcggccatcggcggcatggtgcccctcttccccgagtccgagaca
tccggcgccggggagatcgcccccgcccccgccctggccggtcacgcccacggccacgcc
tcggcccggcccgtggcgacctcggccttcgaatcggcccgccagaagggctacaccggg
gatccctgccccgagtgcggccacctgaccctggtccgcaacggcgcctgcctcaagtgc
cagacctgcggcgccaccacgggctgcagctag

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