Mesoterricola sediminis: METESE_16340
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Entry
METESE_16340 CDS
T09356
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
msea
Mesoterricola sediminis
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msea03400
]
METESE_16340 (radA)
DNA repair and recombination proteins [BR:
msea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
METESE_16340 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
AAA_16
DnaB_C
AAA
DUF7129
ChlI
Lon_C
AAA_22
DUF7125
NACHT
AAA_5
Rad51
CobU
ABC_tran
NTPase_1
AAA_33
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BDU76676
UniProt:
A0AA48GP44
LinkDB
All DBs
Position
1890603..1891988
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AA seq
461 aa
AA seq
DB search
MARTTSHYECTACGARHAQPLGKCGACGSFGTIEEVRGAMKKDLARARSAFSESNYQDPV
PLLSVEISETQRTPTGLDELDRVLGGGVVPGMVVLLGGEPGIGKSTLVLQWAAACAGDVL
YASGEESERQIKLRAQRLGAENPRIHLFAETDVRRILEAADRMKPALLLVDSIQTLFDPE
FEASSGSVSQVRGCATLLARWAKATGTPLVLVGHVTKDGSLAGPKVLEHLVDTVLAFEGD
RHHHHRLLRALKNRFGAAFELGVFAMTERGLVPAEGNPFFLEAEPRPGCAATVVLSGTRP
VIVEIQALVASAGLGIPRRTALGIDGQRLSMLCAVAERRGGIQLHDRDVYLNVAGGLEVE
DPAADLAVVAALASSATGRLLADRCLFLGEVGLTGEVRPVSQLPLRLQEGRRLGFHAAAV
PRLGMDPGLDAPLELHPERGLERLRAKPWLRGRPEGADEEG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaccacgtcccattacgaatgcaccgcctgcggcgcccgccatgcccagccc
ctgggcaagtgcggggcctgcgggtccttcggcaccatcgaggaggtgcggggggccatg
aagaaggacctggcccgggcccggagcgccttctccgagagcaactaccaggaccccgtg
cccctcctctccgtggagatcagcgagacccagcggacccccacgggcctggacgaactc
gaccgggtgctgggcggcggggtggttccgggcatggtggtgctcctgggcggggagccc
ggcatcggcaagtccaccctggtgctccagtgggccgccgcctgcgccggggatgtgctc
tacgccagcggcgaggagagtgagcggcagatcaagctgagggcccagcgcctgggggcc
gagaacccccgcatccacctgttcgccgagacggacgtgcgccgcatcctcgaggcggcg
gaccgcatgaagccggccctcctcctggtggattccatccagaccctcttcgaccccgag
ttcgaggcctcctccgggtccgtcagccaggtccgggggtgcgccaccctcctcgcccgg
tgggccaaggccacggggacccccctggtcctggtgggccacgtcaccaaggacggcagc
ctcgccgggcccaaggtgctggagcacctggtggacaccgtcctggccttcgagggggac
cggcaccaccaccaccgcctcctccgcgccctcaagaaccgcttcggcgccgccttcgaa
ctgggcgtcttcgccatgaccgagcggggcctcgtgcccgccgaagggaaccccttcttc
ctggaagccgagccgaggcccggctgcgcggccacggtcgttctctccggcacccggccg
gtcatcgtggaaatccaggccctcgtcgcctcggccggcctcggcattccgcgccggacg
gccctcggcatcgacggccagcggctgtccatgctctgcgccgtggcggaacgccggggg
ggcatccagctccatgaccgggacgtgtacctgaacgtggccgggggcctggaggtggag
gaccccgcggccgacttggccgtcgtcgccgccctggccagcagcgccacgggacgcctc
ctggccgaccgctgtctcttcctgggcgaggtgggcctcaccggcgaggtgcgccccgtc
tcccagctgcccctgcgcctccaggaaggccgccgcctgggcttccacgcggccgcggtg
ccccgcctgggcatggaccccggcctggacgctccgctggagctccaccccgaacggggc
ctcgaacggctccgggccaagccctggctccgggggcgtccggagggcgcggacgaggag
gggtga
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