Mesoterricola sediminis: METESE_19440
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Entry
METESE_19440 CDS
T09356
Name
(GenBank) AraC family transcriptional regulator
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
msea
Mesoterricola sediminis
Pathway
msea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
METESE_19440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msea03400
]
METESE_19440
Enzymes [BR:
msea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
METESE_19440
DNA repair and recombination proteins [BR:
msea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
METESE_19440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HhH-GPD
AlkA_N
HTH_AraC
Transposase_20
OGG_N
Motif
Other DBs
NCBI-ProteinID:
BDU76986
UniProt:
A0AA48KCE9
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All DBs
Position
2260960..2262210
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AA seq
416 aa
AA seq
DB search
MRQSDASIPPGIPDWQALEELMAAARRNPGEFRTPAALAAAAGLTPQGLEAAFLRHVHAR
PEAFLEAARVDAACRHLLDAFGPPERAGEACGFFGTAAFRAAFRRHTGMTPARYQALGQG
EPAFTLDLPAGYRIEDVLAYHGRDPLSHSERVDGGRLLKAFRVDGADVAVDLAFGGQAVK
VRLHGGGPADPVRMGRVHRRVVRMLGLASDPGPFEAFTAAHPAFRDLVAPRSGLRIPLTA
DVWECLVWAILGQQVNLAFAYTLRRRLTEACGGEAPFGLRAHPGPRAVAALDPAVLAPLQ
FSRGKAAYLVAAARETAAGRLPLEALPAGTATGAEARLRAQKGVGPWTAHYVLMRGCGFQ
DCVPLGDAGLTAALQRHHALDHRPGPAETAGLMAPYAPHRSLATFHLWASLKGVPA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagtccgatgcgtccatcccccccggaattcccgactggcaggccctggaggag
ctgatggccgcggcccggcgaaatccgggcgaattccgcaccccggcggccctcgcggcg
gcggcgggcctcaccccccaggggctggaggccgccttcctccgccacgtccacgcgagg
ccggaggccttcctggaggcggcccgggtggacgcggcctgccgccacctgctggacgcc
ttcggtccccccgagcgggcgggcgaagcctgcgggttcttcgggacggccgccttccgg
gcggcgttccggcgccacacgggcatgacgcccgcccgctaccaggccctgggccagggg
gagccggccttcaccctggacctgcccgccgggtaccgcatcgaggatgtgctggcctac
catggccgggatcccctgagccactccgagcgggtggacggagggcggctcctcaaggcc
ttccgggtggacggggcggacgtggccgtggacctggccttcggcggccaggccgtgaag
gtccgcctccacggcggcgggccggccgaccccgtgcgcatggggcgggtccaccggcgc
gtggtgcgcatgctgggcctcgcctccgatccgggtcccttcgaggccttcacggcggcc
caccccgccttccgggacctggtggccccccggtcggggctgcgcatccccctgaccgcg
gacgtgtgggagtgcctggtctgggccatcctgggccagcaggtgaacctggccttcgcc
tacaccctgcgccggcggctgacggaggcctgcggcggggaggcgcccttcgggctccgg
gcccaccccggcccccgggccgtcgcggccctggacccggccgtcctggcccccctccag
ttctcccggggcaaggccgcctacctcgtcgccgccgcccgggagacggccgcggggcgc
ctcccgctggaagccctgcccgcgggcacggcgacgggcgccgaggcccgtctgcgcgcc
cagaagggcgtcggcccctggacggcccactacgtcctcatgcgcggctgcggcttccag
gactgcgtccccctgggggacgccggcctcaccgcggccctccagcggcaccacgccctc
gatcaccgccccggccccgccgagaccgccggcctcatggccccctacgccccccaccgc
agcctggccaccttccatctgtgggccagcctcaagggggttccggcctga
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