Mesoterricola sediminis: METESE_19870
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Entry
METESE_19870 CDS
T09356
Symbol
rocD
Name
(GenBank) ornithine aminotransferase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
msea
Mesoterricola sediminis
Pathway
msea00330
Arginine and proline metabolism
msea01100
Metabolic pathways
msea01110
Biosynthesis of secondary metabolites
Module
msea_M00972
Proline metabolism
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
METESE_19870 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msea01007
]
METESE_19870 (rocD)
Enzymes [BR:
msea01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
METESE_19870 (rocD)
Amino acid related enzymes [BR:
msea01007
]
Aminotransferase (transaminase)
Class III
METESE_19870 (rocD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BDU77029
UniProt:
A0AA48KCD0
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All DBs
Position
2306823..2308037
Genome browser
AA seq
404 aa
AA seq
DB search
MSTPAGTSSQAFIAQENQYGAHNYHPLDVVCTKGEGVYLTDVDGKKYMDFLAAYSAVNQG
HNHPRIGEAMIRQIRELALTSRAFRNDQFPPLLEKLCRITGFDKALLMNSGAEAVETALK
AARKWGYDKKGIEYPKAEIIVADGNFHGRTTTIVGFSTDPDSTSRFGPFTPGFRIVPYGD
LEAVKAAINPNTCAIFMEPIQGEGGVVIPPKGFLKGLRDLADRNNVLLILDEIQSGLGRT
GKLFAFEHEGIRPDGITIGKALSGGFYPVSAFLAKDEVMDVFTPGIHGSTYGGNPLACAV
ASEALDVLVDEKLVERAAELGDHLRHRLTTMKTDKLAEVRVIGLWAGVQLKPEAGGARKY
CYQLKDRGMLCKDTHVDTIRLAPPLVITKAQIDWAVDQLEAVLA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccccggccggcacctcttcccaggccttcatcgcccaggaaaaccagtacgga
gcccacaactaccatcccctggacgtggtgtgcaccaagggcgagggcgtctacctgacc
gacgtggacggcaagaagtacatggacttcctcgccgcctactccgccgtgaaccagggc
cacaaccacccccgcatcggcgaggccatgatccgccagatccgcgagctggccctcacc
agccgcgccttccgcaacgaccagttccccccgctgctcgagaagctctgccgcatcacc
ggcttcgacaaggccctgctgatgaacagcggcgccgaggccgtggagaccgccctcaag
gccgcgcgcaagtggggctacgacaagaagggcatcgagtacccgaaggccgagatcatc
gtggccgacggcaacttccacggccgcaccaccaccatcgtgggcttctccaccgatccc
gactccaccagccgcttcgggcccttcacccccggcttcaggatcgtgccctacggggac
ctggaggccgtcaaggccgccatcaaccccaacacctgcgccatcttcatggagcccatc
cagggcgagggcggcgtggtgatcccccccaagggcttcctcaagggcctccgggacctg
gccgaccgcaacaacgtcctcctcatcctggacgagatccagtccggcctgggccgcacc
ggcaagctcttcgccttcgagcacgagggcatccgccccgacggcatcaccatcggcaag
gccctctcgggcggcttctaccccgtcagcgccttcctggccaaggacgaggtgatggac
gtcttcacccccggcatccacggctccacctacggcggcaaccccctggcctgcgccgtg
gcctccgaggccctggacgtgctggtggacgagaagctcgtggagcgcgccgcggagctg
ggcgaccacctgcgccaccgcctcaccaccatgaagaccgacaagctcgccgaggtccgg
gtcatcggcctctgggccggcgtgcagctcaagcccgaggccggcggcgcccgcaagtac
tgctaccagctcaaggaccggggcatgctctgcaaggacacccacgtggacaccatccgc
ctggcgccccccctcgtcatcaccaaggcccagatcgactgggccgtggaccagctcgag
gccgtcctggcctga
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