Mesoterricola sediminis: METESE_20180
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Entry
METESE_20180 CDS
T09356
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msea
Mesoterricola sediminis
Pathway
msea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
METESE_20180 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msea03019
]
METESE_20180 (groL)
03110 Chaperones and folding catalysts [BR:
msea03110
]
METESE_20180 (groL)
03029 Mitochondrial biogenesis [BR:
msea03029
]
METESE_20180 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msea04147
]
METESE_20180 (groL)
Enzymes [BR:
msea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
METESE_20180 (groL)
Messenger RNA biogenesis [BR:
msea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
METESE_20180 (groL)
Chaperones and folding catalysts [BR:
msea03110
]
Heat shock proteins
HSP60 / Chaperonin
METESE_20180 (groL)
Mitochondrial biogenesis [BR:
msea03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
METESE_20180 (groL)
Exosome [BR:
msea04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
METESE_20180 (groL)
Exosomal proteins of other body fluids (saliva and urine)
METESE_20180 (groL)
Exosomal proteins of breast cancer cells
METESE_20180 (groL)
Exosomal proteins of colorectal cancer cells
METESE_20180 (groL)
Exosomal proteins of bladder cancer cells
METESE_20180 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
BDU77060
UniProt:
A0AA48KDH0
LinkDB
All DBs
Position
complement(2344855..2346489)
Genome browser
AA seq
544 aa
AA seq
DB search
MTAKSIIYAEEARQAILRGVNKLADAVQVTLGPKGRNVLIEKKFGSPLMTKDGVTVAKEI
ELKDKHENMGASLVREVASKTSDIAGDGTTTATVLARAIYKEGIKAVVSGANTMEIKKGI
DLAVDTVVAAIDEIKKPVEGNAIAQVGSISANGDEEIGKIIAEAMAKVGKDGVITVEEAK
GRDTELNVVEGMQFDRGYLSPYFVTNPDQMKVELESPLVLIYEKKISNMRDLLPLLEQVV
NSRRPLLIIAEDVDGEALATLVVNKIRGTLNIAAVKAPGFGDRRKAMLEDIAILTGGKAI
TEDLGLKLENLQLADLGTAKKIVIDKENTTIIEGAGATDAIQGRVKQIRAQIEISTSDYD
KEKLQERLAKLVGGVAVIKVGAASETEMKEKKARVEDAMHATKAAVEDGIVAGGGVALLR
ALPKLAAVKAIGDQATGVAIVQKALEEPLRQIANNAGVEGSVIVNRVKEEKGNFGFNAAT
GEFGDMVAFGVIDPAKVTKSALRNASSVAAMMLTTEAIVCEIPEEKKAAPMGGAPGMGGM
EDMY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaagtccatcatctacgccgaggaagcccgtcaggccattctgcgcggcgtc
aacaagctcgccgacgccgtccaggtgaccctcggccccaagggccgcaacgtcctcatc
gagaagaagttcggctccccgctcatgaccaaggacggcgtcaccgtcgccaaggagatc
gagctcaaggacaagcacgagaacatgggcgcctccctggtgcgtgaggtcgcctccaag
acctccgacatcgccggcgacggcaccaccaccgccaccgtgctggcccgcgccatctac
aaggaaggcatcaaggccgtcgtgagcggcgccaacaccatggagatcaagaagggcatc
gacctcgccgtcgacaccgtcgtggccgccatcgacgagatcaagaagcccgtcgagggc
aacgcgatcgcccaggtcggctccatctccgccaacggcgacgaggagatcggcaagatc
atcgccgaggccatggccaaggtcggcaaggacggcgtcatcaccgtcgaggaggccaag
ggccgcgacaccgagctgaacgtggtcgagggcatgcagttcgaccgcggctacctcagc
ccctacttcgtcaccaaccccgaccagatgaaggtcgagctggagagccccctcgtcctc
atctacgagaagaagatctccaacatgcgcgacctcctgcccctcctggagcaggtcgtc
aacagccgccgccccctgctgatcatcgccgaggacgtcgacggcgaggccctggccacc
ctcgtggtcaacaagatccgcggcaccctgaacatcgccgccgtcaaggcccccggcttc
ggcgaccgccgcaaggccatgctcgaggacatcgccatcctcaccggcggcaaggccatc
accgaggacctcggcctcaagctcgagaacctccagctggccgacctcggcaccgccaag
aagatcgtcatcgacaaggagaacaccacgatcatcgagggcgccggcgccaccgacgcc
atccagggccgcgtgaagcagatccgcgcccagatcgagatctccaccagcgactacgac
aaggagaagctgcaggagcgcctggccaagctcgtgggcggcgtcgccgtcatcaaggtc
ggcgcggccagcgagaccgagatgaaggagaagaaggcccgcgtcgaggacgccatgcac
gccaccaaggccgccgtcgaggacggcatcgtggccggcggcggcgtcgcgctgctccgc
gccctgcccaagctggccgccgtcaaggcgattggcgaccaggccacgggcgtcgccatc
gtccagaaggccctggaggagcccctccgccagatcgccaacaacgccggcgtggaaggc
agcgtcatcgtcaaccgcgtcaaggaggagaagggcaacttcggcttcaacgccgccacc
ggcgaattcggcgacatggtggccttcggcgtcatcgaccccgccaaggtgaccaagagc
gccctgcgcaacgcctcgtccgtggccgccatgatgctcaccaccgaagccatcgtgtgc
gagatccccgaagagaagaaggccgctcccatgggcggcgcccccggcatgggcggcatg
gaggacatgtactga
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integrated database retrieval system
