Mesoterricola sediminis: METESE_26860
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Entry
METESE_26860 CDS
T09356
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
msea
Mesoterricola sediminis
Pathway
msea03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
METESE_26860 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
msea03011
]
METESE_26860 (rpsA)
Ribosome [BR:
msea03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
METESE_26860 (rpsA)
Bacteria
METESE_26860 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
PCB_OB
OB_RRP5_4th
DUF2110
EhaG
Motif
Other DBs
NCBI-ProteinID:
BDU77728
UniProt:
A0AA48H871
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All DBs
Position
3157036..3158796
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AA seq
586 aa
AA seq
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MSQLSTLIKGKGSKQLGRITVLDASLLEDETPESQEFLDALQGETRALREEEVVRGVVVE
IRGKDVIIDIGYKGSGTVNLDEFNNPDGTVGVAVGDVVEVLLEHLEDQNGNVRLSRERAE
KMKIWDEVEKAFRANLTVHGVVLEKVKGGLAVDIGIRAFLPGSQVDTKPVRNLDPYLGKS
FDMKVIKVNRRRGNIVLSRKLFLETINANLKEETLAGLEEGKLVEGTVKNITEYGAFVDL
GGVDGLLHITDMSWGRLNHPSEMFQVGDKVEVAILKYDKDTERVSLGYKQKFADPWLTVE
DRYPVNATVKGKVVSITDYGAFVELEPGVEGLVHVSEMSWTKKVKSAKGMVNLGDMVEAQ
ILQVDPESRRISLGMKQITPNPWMEVAEKYQIGQVVNGTVRNITEFGAFVELEEGIDGLI
HVSDFSWTKKIKHPGEVVKKGDTVTAKVLSLDPLNQRMSLGVKQMEPNVWEIFFEGHHVG
DTITGRIARLTDFGAFVDLGEGIEGLVHVSELSRKRVEEITKEFAPGQELTMKIVKLDPT
EHRIGLSVKQYEMDQERGDLEAAKSSLQPFKKATLADAFKNVERED
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaactttcaacactcatcaagggcaaaggctccaagcagctgggccggatcacg
gtgctcgacgcgtcgctgctggaggacgagacccctgagtcccaggagtttctcgatgcc
cttcagggtgagacccgggcgctccgcgaggaggaggtcgtccgcggcgtggtcgtcgag
atccgcggcaaggacgtcatcatcgacatcgggtacaagggctcgggcacggtgaacctg
gacgagttcaacaaccccgacggcaccgtcggcgtggccgtcggcgacgtggtcgaagtg
ctcctcgagcacctcgaggaccagaacggcaacgtccgcctgagccgcgagcgcgccgag
aagatgaagatctgggacgaggtggagaaggccttccgcgccaacctcaccgtccacggc
gtcgtgctggagaaggtgaagggcggcctggccgtcgacatcggcatccgcgcgttcctg
cccggcagccaggtcgacacgaagcccgtgcgcaacctggatccgtacctcggcaagtcc
ttcgacatgaaggtcatcaaggtgaaccgccgccggggcaacatcgtcctgagccgcaag
ctcttcctcgagaccatcaacgcgaacctgaaggaagagacgctggccggcctcgaggaa
ggcaagctggtcgagggcaccgtcaagaacatcaccgagtacggcgccttcgtcgacctc
ggcggcgtggacggcctgctgcacatcaccgacatgtcctggggccgcctgaaccacccc
agcgagatgttccaggtgggcgacaaggtcgaggtggccatcctcaagtacgacaaggac
accgagcgcgtgtccctgggctacaagcagaagttcgccgatccctggctcaccgtcgag
gaccgctacccggtcaacgccacggtcaagggcaaggtcgtctcgatcaccgactacggc
gccttcgtggagctggagcccggcgtcgagggcctggtgcacgtctccgagatgagctgg
accaagaaggtcaagtccgccaagggcatggtcaacctcggcgacatggtcgaggcccag
atcctgcaggtggatcccgagagccgccgcatcagcctcggcatgaagcagatcaccccc
aacccctggatggaggtcgccgagaagtaccagatcggccaggtggtgaacggcaccgtc
cgcaacatcaccgagttcggcgccttcgtcgagctggaggagggcatcgacggcctgatc
cacgtctccgacttcagctggaccaagaagatcaagcaccccggcgaagtggtcaagaag
ggcgacaccgtcaccgccaaggtcctcagcctggatcccctgaaccagcgcatgagcctg
ggcgtcaagcagatggaacccaacgtctgggagatcttcttcgaaggccaccacgtgggc
gacaccatcaccggccgcatcgcgcgcctgaccgacttcggcgccttcgtcgacctcggc
gaggggatcgagggcctggtgcacgtctccgagctcagccgcaagcgggtcgaggagatc
accaaggagttcgcccccggccaggagctcacgatgaagatcgtgaagctggatcccacc
gagcaccgcatcggcctctcggtcaagcagtacgagatggaccaggagcgcggcgacctc
gaggccgccaagagcagcctgcagcccttcaagaaggccaccctggctgacgcgttcaag
aacgtggagcgcgaggactag
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