Mesoterricola sediminis: METESE_26960
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Entry
METESE_26960 CDS
T09356
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
msea
Mesoterricola sediminis
Pathway
msea02024
Quorum sensing
msea03060
Protein export
msea03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
METESE_26960 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
METESE_26960 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
METESE_26960 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
msea02044
]
METESE_26960 (ffh)
Enzymes [BR:
msea01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
METESE_26960 (ffh)
Secretion system [BR:
msea02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
METESE_26960 (ffh)
Eukaryotic Sec-SRP protein
METESE_26960 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_33
AAA_22
6PF2K
ATP_bind_1
AAA_18
AAA_30
AAA_16
KTI12
APS_kinase
Thymidylate_kin
nSTAND3
AAA_31
CLP1_P
Dynamin_M
KAP_NTPase
ResIII
AAA_17
Motif
Other DBs
NCBI-ProteinID:
BDU77738
UniProt:
A0AA48KGU1
LinkDB
All DBs
Position
complement(3166161..3167516)
Genome browser
AA seq
451 aa
AA seq
DB search
MFESLSEKLGRALKSLAGQSRLTEKNIEEALREVRMALLEADVHVQVARAFLQRVKEKAL
GVEVLQGLNPTQQFIDIVHQELTAIMGGVAPEQPLDFASRPPTVVMMVGLQGSGKTTTCG
KLAKYLKKNGRSPLLVPADVYRPAAIEQLHVVAKDAGVPSYRTEERRPVEICKAAVAEAG
LKGWDVVILDTAGRLHLDEVLMDELAAIKAACGPTEIIFVADAMTGQDAVRSAGAFHEKL
GSTGVVLTKADGDTRGGAAFSIKHITGTPIKFVGAGEKLDDFERFHPDRMAQRILGMGDV
LTLIEHAKDRIDEKDAERMAQRLIKNQFTLDDMRSQFQQIQKLGSMQKILGMLPGMGKMK
DQLETVVTDKRVKHLEAILNSMTPKERQNHNLLDGKRKRRIAAGSGRPVHEVNQLLKQYL
QMKKMMSQMNNPSFMKRMQAMSNMPNPPFSL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaatccctttccgaaaaactcggccgcgccctcaagtccctcgcgggccagagc
cgcctcaccgagaagaacatcgaggaggccctccgcgaggtccgcatggccctcctcgag
gcggacgtgcacgtgcaggtcgcccgggccttcctgcagcgggtgaaggagaaggcgctg
ggggtggaggtcctgcagggcctgaatccgacccagcagttcatcgacatcgtgcaccag
gagctcaccgccatcatgggcggcgtggcccccgagcagcccctggacttcgccagccgg
ccgcccaccgtggtgatgatggtgggcctccagggctcgggcaagaccacgacctgcggc
aagctcgccaagtatctcaagaagaacggccgttcccccctgctcgtgcccgcggacgtg
taccgcccggcggccatcgagcagctccatgtggtggccaaggacgccggcgtccccagc
taccgcaccgaggagcgccgccccgtggagatctgcaaggccgcggtggcggaggcgggt
ctcaagggctgggacgtggtcatcctggacacggctggccgtctgcacctcgacgaggtg
ctgatggacgagttggcagccatcaaggcggcctgcggtccgaccgaaatcatcttcgtg
gccgacgccatgaccggccaggacgccgtgcgcagcgccggcgccttccacgagaagctg
ggcagcaccggcgtcgtgctcaccaaggccgacggcgacacccgcggcggcgcggccttc
agcatcaagcacatcaccggcacccccatcaagttcgtgggcgcgggcgagaagctggac
gacttcgagcgcttccaccccgatcgcatggcccagcgcatcctgggcatgggcgacgtc
ctcaccctcatcgagcacgccaaggaccgcatcgacgagaaggatgcggagcgcatggcc
cagcgcctcatcaagaaccagttcaccctggacgacatgcggagccagttccagcagatc
caaaagctggggagcatgcagaagatcctgggcatgctgccgggcatgggcaagatgaag
gaccagctggagaccgtcgtgacggacaagcgggtcaagcacctggaggccatcctcaat
tccatgacccccaaggagcggcagaaccacaacctcctggacggcaagcgcaagcgccgc
atcgccgcgggctccggccggccggtccacgaagtcaatcaacttctgaagcagtacctg
cagatgaagaagatgatgagccagatgaacaacccgtcgttcatgaagcggatgcaggcc
atgtccaacatgcccaacccgcccttttccctctaa
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