Mesoterricola sediminis: METESE_27840
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Entry
METESE_27840 CDS
T09356
Name
(GenBank) putative RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
msea
Mesoterricola sediminis
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msea03009
]
METESE_27840
Enzymes [BR:
msea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
METESE_27840
Ribosome biogenesis [BR:
msea03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
METESE_27840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
WH_Halo
Motif
Other DBs
NCBI-ProteinID:
BDU77826
UniProt:
A0AA48KD53
LinkDB
All DBs
Position
complement(3269588..3270595)
Genome browser
AA seq
335 aa
AA seq
DB search
MSEPTIHHLPEGAPRLDRFLAEAHPDIARSRWEAWIRSGQVLVDGVAATKPGTRLRAGAQ
VATTLPDPAPPAHFLEPEAFDLPTLFEDNRLWIVDKPAGLVVHPGPGHPSGTVLNALLGR
LHAAPAPLAEGEDPAEEDEEADAPRWPGLVHRLDRFTTGCLAMAKDQGAQTALQAQFKAR
SVDKRYLAIARMSRRLPEAGSLLVDAPIGRQRSDRLKMAVVPQGRPSQTRVRVLGRAAGL
ALVECELLTGRTHQIRVHLAHLGAPILGDPLYGGAGAWMDADRRSHACPTPMLHAWRLAL
DHPGDGRRLSCEAPLPEAFREVLAGLGLAAPAPLS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaacccacgatccatcacctgcccgagggcgcgccgcgcctggaccggttcctc
gccgaggcccaccccgacatcgcccgctcccgctgggaggcctggatccggtcgggccag
gtcctggtggacggggtcgcggccaccaagccgggcacccgcctgcgcgccggcgcccag
gtcgccaccaccctgccggatcccgcgcccccggcccatttcctcgagccggaggccttc
gacctgcccaccctcttcgaggacaaccgcctgtggatcgtggacaagcccgcgggcctc
gtcgtgcatcccggtcccgggcatccctccggcaccgtgctcaacgccctcctgggccgt
ctccacgccgccccggcgcccctggccgagggggaggatccggcggaggaggacgaggag
gcggacgctccccggtggccgggcctggtccaccgcctggaccgcttcaccaccggctgc
ctggccatggccaaggaccagggggcccagaccgccctccaggcccagttcaaggcccgg
tcggtggacaagcgctacctggcgatcgcgcgcatgagccggcggttgcccgaggccggc
tctctgctggtggacgcccccatcggccgccagcgctcggaccgcctcaagatggccgtg
gtcccccagggccggccctcccagacccgggtccgggtcctcggccgggccgcgggcctc
gccctggtggaatgcgaactgctcacgggccggacccaccagatccgggtccacctggcc
cacctgggcgcccccatcctgggcgaccccctgtacgggggcgccggggcctggatggac
gccgaccgccgcagccacgcctgccccacccccatgctccacgcctggcgcctggccctg
gatcaccccggggacggccgccgcctctcctgcgaggccccccttccggaggccttccgg
gaggtcctggcgggcctgggcctggcggcccccgctcccctttcctga
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