Mesoterricola sediminis: METESE_29610
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Entry
METESE_29610 CDS
T09356
Symbol
xylR
Name
(GenBank) XylR family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
msea
Mesoterricola sediminis
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msea03000
]
METESE_29610 (xylR)
Transcription factors [BR:
msea03000
]
Prokaryotic type
Helix-turn-helix
LacI family
METESE_29610 (xylR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
HTH_18
HTH_AraC
HTH_23
PBP1_XylR
HTH_31
Peripla_BP_4
HTH_7
HTH_26
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BDU78003
UniProt:
A0AA48HGX1
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Position
3489489..3490667
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AA seq
392 aa
AA seq
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MPRIRHIALLVPASGGYSRGVCRGVATFALDRDDWLIFPYERAEFTKLPPWLKKGHIDGI
IGFISNPDLGRQITSLGVPIVDVQGEGNCPDFPWIDTDAEVVAGLAEDFFTQAGFAHFAF
CGYPGVFFSDRRSDAFTGLVRGKGVEPHVYEPPPRVTTTIRNQFREMRGLEYEPALAAWL
ARLPKPVAILACNDTRGQQIITACRDLGISMPADVSVMGVDNDEILCRLCRPTLTSIAPD
TEGIGILAGRLLNAILEGEAVEPRLYKQPPLRVVERESTDVTTAQNPLVLAASRVIRDRA
CRGISVEQVCELAGCSRSTLDGLFKKHLGRSIAGEMVRVRLGTAMRLLENTTLTLDEIAT
ACGFQSATYFCRFFKRESGSTPAQYRSAQALR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgccccgaatccgccatatcgccctcctggtccccgcctcgggcggctactcccggggc
gtctgccgcggggtggccaccttcgccctggaccgggacgattggctcatctttccctat
gagcgggcggagttcaccaagctcccgccctggctgaaaaagggccacatcgacgggatc
atcggcttcatctccaacccggacctgggccggcagatcacctccctgggcgtgcccatc
gtggatgtgcagggggagggcaactgcccggacttcccctggatcgacacggacgccgag
gtggtggccggtctggccgaggacttcttcacccaggccggcttcgcgcacttcgccttc
tgcggctatccgggggtgttcttctcggaccggcggtcggacgccttcacgggcctggtg
cggggcaagggcgtggaaccccacgtgtacgagcccccgccccgggtgaccacgacgatc
cgcaaccagttccgggaaatgcggggcctggagtacgagccggccttggcggcctggctg
gcgcgcctccccaagcccgtggccatcctggcctgcaacgacacccggggccagcagatc
atcaccgcctgccgggacctggggatctccatgccggccgacgtgtcggtcatgggcgtg
gacaacgacgagatcctctgccgcctgtgccggccgaccctcaccagcatcgccccggac
acggagggcatcggcatcctggccggccggctcctcaacgccatcctggagggggaggcg
gtggaaccccgcctgtacaagcagccgcccctgcgtgtggtggagcgggaatccacggat
gtgacgacggcccagaaccccctggtgctggcggcctcccgggtgatccgggaccgggcc
tgccgggggatctcggtggaacaggtgtgcgagttggcgggctgctcccgctcgaccctg
gacggcctgttcaagaagcacctgggccgctccatcgccggtgaaatggtgcgggtgcgc
ctgggcacggccatgcgcctgctcgagaacacgaccctgaccctggacgagatcgccacg
gcctgcggcttccagtcggccacctacttctgccggttcttcaagcgggagagcggctca
acgcccgcccagtaccgcagcgcccaggccctccgctga
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