Mesoterricola sediminis: METESE_33390
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Entry
METESE_33390 CDS
T09356
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
msea
Mesoterricola sediminis
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msea03000
]
METESE_33390
Transcription factors [BR:
msea03000
]
Prokaryotic type
Helix-turn-helix
LysR family
METESE_33390
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BDU78381
UniProt:
A0AA48KDN0
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Position
3950384..3951283
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AA seq
299 aa
AA seq
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MEWLNYHHLFYFWTVAREGSVTRAAAALHLAQPTLTAQIRTLEGSLGGPLFTRVGRGLAM
TDLGRVAYGYAEQIFGLGRELLDASRGRTGAGPIRFAVGISDALSKLTVFRLLRPALELE
QPVRLSCIEEGNEVHFAMLLRHELDLVLSDVPFTPRSGPRAYNHLLGEAPVKLYGTKALL
RRHPGSFPGRLRGAPFLLPPRDTALRRALDHWLDRERLEPAIVAEISDGALLKTFGGEGR
GFLPAPAVLEEAMARQHGLHPAGEVPGIRERIYAVSAERRLQHPAVLAIREAAVREVFV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaatggctgaactaccaccacctgttctacttctggacggtcgcccgtgaggggagc
gtcacccgggccgccgccgcgctccacctcgcccagcccaccctcaccgcccagatccgg
accctggagggcagcctcggcgggcccctcttcacccgcgtgggacggggcctggcgatg
acggacctcggccgggtggcctacgggtacgcggagcagatcttcggcctgggccgcgag
ctcctcgacgcctcccggggccggaccggcgcgggcccgatccgcttcgccgtgggcatc
tccgacgccctctccaagctcaccgtcttccgcctcctccggcccgccctggagctggag
caacccgtgcggctctcctgcatcgaggagggcaacgaggtccacttcgccatgctcctc
cgccacgagctcgacctcgtgctgtccgacgtccccttcaccccccggagcgggccccgc
gcctacaaccacctgctcggcgaagccccggtcaagctctacggcaccaaggccctgctc
cggcggcacccgggatccttccccggccgcctccggggggcccccttcctccttccgccc
cgggacaccgccctccgccgggccctggaccactggctggaccgggagcgcctggaaccc
gccatcgtggcggagatcagcgacggcgccctcctcaagaccttcggaggcgaaggccgc
ggcttcctgcccgcccccgccgtgctggaggaggccatggcccgccagcacgggctccat
cccgccggcgaggtgccggggatccgggaacgcatctatgccgtctccgccgagcgccgc
ctccagcaccccgccgtcctcgccatccgggaggccgcggtccgggaggttttcgtgtag
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