Mesoterricola sediminis: METESE_37060
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Entry
METESE_37060 CDS
T09356
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
msea
Mesoterricola sediminis
Pathway
msea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
METESE_37060 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msea03400
]
METESE_37060 (uvrA)
DNA repair and recombination proteins [BR:
msea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
METESE_37060 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
METESE_37060 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
nSTAND3
AAA_23
RsgA_GTPase
AAA_22
BCA_ABC_TP_C
AAA_21
NACHT
DnaJ_CXXCXGXG
AAA_18
ATPase
cobW
Viral_helicase1
NTPase_1
T2SSE
P-loop_TraG
DUF4350
HTH_69
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
BDU78748
UniProt:
A0AA48HA76
LinkDB
All DBs
Position
complement(4364539..4367370)
Genome browser
AA seq
943 aa
AA seq
DB search
MDSITIKGARVHNLKNVDLTLPRNRLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSSY
ARMFLDQMEKPDVDSIEGLSPAISIEQKTTSRNPRSTVATVTEIYDYLRLLFARVGKPMC
MACGRPISSQTVQEMADQILARPEGTRIQVMAPVVRARKGEFKKLLADLMKRGYIRARVN
GEMLDLTDGLPDLDKQKKHTIEVVIDRLKNAEGISSRLADSLEIACGLAEGSALVDLGGE
ERLFSSKLACNHVTCARFGQGLPDLEPRSFSFNSPFGACPACDGLGFKRQFAEELIVPNP
DLSIAQGCFTASGWKTAGEDGWRGQFLAQLSKAMGFKLDTPWKKLSADVRRVLLHGLDRK
MKFVYQNKGNRYEFMHEFEGVIGNLERRYRETTSEEIRAEMEESMRVIPCETCEGTRLKP
EILSVFVQGKHIAGVCAQSVREARAWFDALALEGTEAVIAGKVLKEIKERLGFLDDVGLG
YLTLDRSAATLSGGEGQRIRLATQIGSKLQGVMYVLDEPSIGLHQRDNQKLLATLKEMRD
LGNSVFVVEHDLDTILAADHVVDLGPGAGEHGGRVVAQGTPQEIARSATSVTGAFLCGKE
HIPVPRKRRKAARGVIQVLGAQENNLQKVDAAFPIGLFTCVTGVSGSGKSTLVNEILYKA
LANQLHQGVHVVGRHKAIKGLELIDKVIDIDQAPIGRTPRSNPATYTGLFTPLRELFSQL
PESRARGYTPGRFSFNVKGGRCEKCEGDGLIRIEMHFLPDVYVTCEQCKGKRYNRETLEI
HYKGKSISDILAMTVEEALGIFEPVPTLANKLQTLVDVGLGYIRLGQSATTLSGGEAQRV
KLARELSKRQTGKTLYILDEPTTGLHLKDIQKLLEVIHRLMEAGNTVVVIEHNLDVIKTA
DWILDMGPEGGGEGGRIIATGTPEEVARDKGSVTGRFLKPYLK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcacgatcaagggcgcccgggtccacaacctgaagaacgtcgacctgacc
cttccccggaaccggctcgtcgtcatcacgggcctgtcgggcagcggcaagtcgagcctg
gccttcgacacgctctacgccgaagggcagcgccgctacgtcgagagcctgtcttcgtac
gcccgcatgttcctggaccagatggaaaagcccgacgtcgacagcatcgaggggctctcc
ccggccatctccatcgagcagaagaccaccagccgcaacccccggtccaccgtggccacc
gtcacggagatctacgactacctccgcctgctcttcgcgcgggtgggcaagcccatgtgc
atggcctgcggccggcccatctccagccagaccgtgcaggagatggccgaccagatcctg
gcccgtcccgagggcacccggatccaggtcatggccccggtcgtccgggcccgcaagggc
gagttcaagaagctcctggccgacctcatgaagcggggctacatccgggcccgggtcaac
ggcgagatgctggacctcaccgacggcctgcccgacctggacaagcagaagaagcacacc
atcgaggtggtcatcgaccgcctcaagaacgccgagggcatcagctcccgcctggcggac
agcctcgagatcgcctgcggcctcgccgaagggtccgccctcgtggacctgggcggcgag
gagcgcctcttctccagcaagctggcctgcaaccatgtgacgtgcgcccggttcggccag
ggcctgcccgacctggagccccgctccttctccttcaactcccccttcggcgcctgcccc
gcctgcgacggcctgggcttcaagcgccagttcgccgaggagctcatcgtccccaacccc
gacctgagcatcgcccagggctgcttcacggccagcggctggaagacggcgggcgaggac
ggttggcgcggccagttcctggcccagctctccaaggccatggggttcaagctcgacacc
ccctggaagaagctgagcgccgacgtgcggcgggtgctcctccacggcctcgaccggaag
atgaagttcgtctaccagaacaaggggaaccgctacgagttcatgcacgagttcgagggg
gtgatcggcaacctggagcgccgctaccgggagaccacgagcgaggagatccgggccgag
atggaggagtccatgcgggtcatcccctgcgagacctgcgagggcacccgcctcaagccc
gagatcctgtccgtcttcgtccagggcaagcacatcgccggcgtctgcgcccagagcgtg
cgcgaggcccgggcctggttcgacgccctcgccctggagggcaccgaggccgtcatcgcc
ggcaaggtgctcaaggagatcaaggagcgcctgggcttcctggacgacgtcggcctgggc
tacctgaccctggaccgctccgcggccaccctcagcggcggcgagggccagcgcatccgc
ctggccacccagatcgggtccaagctccagggcgtcatgtacgtgctcgacgagcccagc
atcggcctccaccagcgggacaaccagaagctcctggccaccctcaaggagatgcgggac
ctgggcaacagcgtgttcgtggtcgagcacgacctggacaccatcctcgccgcggaccac
gtggtggacctggggcccggggccggcgagcacgggggccgcgtggtggcccagggcacc
ccccaggagatcgcccgcagcgccacctcggtcaccggggccttcctctgcggcaaggag
cacatccccgtcccgcggaagcgccgcaaggccgcccggggcgtcatccaggtgctcggc
gcccaggagaacaacctccagaaggtggacgcggccttccccatcggcctgttcacttgc
gtgaccggcgtttccggctccggcaagagcaccctcgtcaacgagatcctctacaaggcc
ctggccaaccagctccaccagggcgtccacgtcgtgggccggcacaaggccatcaagggc
ctggagctcatcgacaaggtcatcgacatcgaccaggcccccatcgggcgcacgccccgt
tcgaacccggccacgtacaccgggctcttcacgcccctgcgggaactcttcagccagctc
cccgaaagccgggcccgggggtacacgccggggcgcttcagcttcaacgtcaagggcggc
cggtgcgagaaatgcgagggcgacggcctgatccgcatcgagatgcacttcctccccgac
gtctacgtcacctgcgagcagtgcaagggcaagcgctacaaccgggagaccctggagatc
cactacaagggcaagagcatctccgacatcctggccatgaccgtggaggaggccctgggc
atcttcgagcccgtcccgaccctcgccaacaagctccagacgctggtggacgtgggcctg
ggctacatccgcctgggccagagcgccaccaccctctccggcggagaggcccagcgggtc
aagctggcccgggagctgtccaagcggcagacgggcaagaccctctacatcctggacgag
ccgaccacgggcctccacctcaaggacatccagaagctcctggaggtgatccaccgcctc
atggaggccgggaacaccgtcgtggtcatcgagcacaacctggacgtcatcaagaccgcc
gactggatcctggacatggggcccgagggcggcggcgagggcgggcgcatcatcgccacg
ggcacccccgaggaggtggcccgggacaagggcagcgtcacgggccgcttcctgaagccc
tacctcaagtag
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