Mesoterricola sediminis: METESE_38060
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Entry
METESE_38060 CDS
T09356
Symbol
pilR_3
Name
(GenBank) type 4 fimbriae expression regulatory protein PilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
msea
Mesoterricola sediminis
Pathway
msea02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
METESE_38060 (pilR_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
msea02022
]
METESE_38060 (pilR_3)
02035 Bacterial motility proteins [BR:
msea02035
]
METESE_38060 (pilR_3)
Two-component system [BR:
msea02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
METESE_38060 (pilR_3)
Bacterial motility proteins [BR:
msea02035
]
Pilus system
Twitching motility proteins
METESE_38060 (pilR_3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
AAA_5
HTH_8
AAA_16
AAA
AAA_2
bpMoxR
Mg_chelatase
AAA_3
MCM
Myosin_head
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BDU78848
UniProt:
A0AA48KHZ5
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Position
complement(4478524..4479984)
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AA seq
486 aa
AA seq
DB search
MHPSAPVRTVLIVEDEPGFRDVLQMGLAPQGFDSQPAGGLAEACQLLSSRAFDAVVSDLR
LKDGSGIDLLTWMKARGLETPVVIMTAYATTETTVQALNLGAVDFLTKTKNDIQELTKVL
KGIFSVSETSPAAEVRDIGDLVGVGPTIRKVQALVGKVARADTTVLVTGESGTGKEIVAR
LIHRYSDRAKGPFVPVNCGALPEALLESELFGYEKGAFTGATGLKRGLFEEAEGGVIFLD
EIGEIPLPLQVKLLRVLQERRVRRVGATGELPVDARVIGATNRDLRDRVARGQFRQDLYY
RLNILHIGLPPLRERQEDLPVLVEHFLARFCRKLGKPPMGLSAEAMDAVRRYRFPGNVRE
LENLMERCVALNSGGPIGVDLFPDEVLRPGPAAPGAVLEIPGAGFDLEGYLAALKRHFLL
GALERAEGNKTRAARLLGMSFRAYRYWLQEMGGAEAPAGAFPLPEAFPPGAAAEGEGKGE
NVNEFL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgtccgcacccgtccgaacggtcctcatcgtggaggacgagcccggtttccgg
gacgtgctccagatgggcctcgccccccagggcttcgacagccagcctgccggcggcctg
gcggaagcctgccagctcctgtccagtcgggccttcgacgccgtggtctcggacctgcgc
ctcaaggacggcagcggcatcgacctcctcacgtggatgaaggcgcgggggctggagacc
cccgtggtcatcatgaccgcctacgccaccaccgagaccacggtccaggccctgaacctg
ggcgcggtggacttcctgaccaagaccaagaacgacatccaggagctcaccaaggtcctc
aaggggatcttctccgtctccgagacctcgccggcggccgaagtgcgggacatcggcgac
ctggtgggggtcggccccaccatccgcaaggtccaggccctcgtcgggaaggtggcccgg
gccgacaccacggtcctcgtcaccggggagagcggcacgggcaaggagatcgtggcgcgc
ctcatccaccgctactcggaccgggccaaggggcccttcgtgcccgtcaactgcggggcc
ctgcccgaggccctcctggagtccgagctcttcggctacgagaagggggccttcaccggc
gccaccggcctgaagcgcgggctcttcgaggaggccgaggggggcgtcatcttcctggac
gagatcggcgagatccccctgcccctgcaggtcaagctcctgcgggtgctccaggagcgg
cgggtgcggcgggtcggcgcgaccggggagctccccgtcgacgcccgggtgatcggggcc
accaaccgggatctccgggaccgggtggcccggggccagttccgccaggacctctactac
cgcctgaacatcctccacatcgggctgccgcccctccgggagcgccaggaggacctgccg
gtcctggtggagcatttcctggcccggttctgccgcaagctggggaagccccccatgggc
ctctcggcggaggccatggacgccgtgcgccgctaccggttccccggcaacgtccgggag
ctcgagaacctcatggagcgctgcgtcgccctcaattccgggggccccatcggcgtggac
ctcttcccggacgaggtcctgcgccccgggcccgccgccccgggcgcggtcctggagatc
ccgggcgccgggttcgacctcgagggctacctggccgcgctcaagcgccatttcctcctg
ggggccctggagcgggccgaggggaacaagacgcgagccgctcgcttgctcggcatgagc
ttccgggcctaccgctactggctccaggagatggggggggcggaagctcccgccggcgcc
ttcccccttcccgaggccttcccgcccggggcggccgcggagggggaggggaaaggcgag
aatgtcaatgaattcttgtaa
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