Mesoterricola sediminis: METESE_38450
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Entry
METESE_38450 CDS
T09356
Symbol
mnmE
Name
(GenBank) tRNA modification GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
msea
Mesoterricola sediminis
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msea03016
]
METESE_38450 (mnmE)
Transfer RNA biogenesis [BR:
msea03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
METESE_38450 (mnmE)
Prokaryotic type
Methyltransferases
METESE_38450 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
ABC_tran
AAA_28
RsgA_GTPase
AIG1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BDU78887
UniProt:
A0AA48H3F9
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All DBs
Position
complement(4520547..4521875)
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AA seq
442 aa
AA seq
DB search
MPDLSGARTGPICAPATPLVPAAVAVVRLSGDSLAERLVSMVALPPPRMAQVRTLAWDGF
RERALVLHFPAPHSYTGEDVVEFQVHGNPLLVRRLLDHLATLGIRGAEPGEFTRRALLNG
KVDLLGAEALRDLVGATTDAQLRQAQARSGGAPPWVARAKAALAPWVARAEACVDYGEEE
GIGLDLTALAADLDPLRRVFHVEQERAAAARWLRDGIRVVLAGRPNAGKSTLFNALAGQD
RAIVTEHPGTTRDVIDVAAQWADLPLHLLDTAGLRESQDPVERLGVARVGEELARADLIL
HLVPLADAAPDPAVEAHLAPYAAKVLRVRTQADLGGAPDPGAPCVSAATGDLAALAEALR
TRFLGAWSPDACLGALDTRRQRELLDELAAQADLLTGLDPATPPEIAASLLQGAWSLLAR
LTGEDRAETALDQVFSGFCLGK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgacctctccggggcccggacgggacccatctgtgcccccgccacccccctggtg
cccgccgccgtggcggtggtgcgcctgtccggcgatagcttggctgagcgcttggtctcc
atggtggcccttccgcctcctcggatggcccaggtgcgcaccctggcctgggacgggttc
cgggagcgggccctggtgctccacttcccggccccccacagctacacgggggaggacgtg
gtggagttccaggtccacggcaacccgctgctcgttcggcggctcctcgaccacctggcc
accctgggcatccggggggcggagccgggcgagttcacccgccgggccctcctgaacggc
aaggtggacctcctgggcgccgaggccctccgggacctggtgggggccacgacggacgcc
cagctgcgccaggcccaggcccggagtgggggcgcgcccccctgggtggcccgggcgaag
gcggccctggcgccctgggtggcccgggcggaggcctgcgtcgactacggggaggaggag
ggcatcggcctcgacctgaccgccctggcggcggacctggaccccctccggcgggtgttc
cacgtggaacaggaacgggcggccgccgcccggtggctccgggacggcatccgggtggtg
ctggccggacgccccaacgccgggaagagcaccctcttcaacgccctggccgggcaggac
cgggccatcgtgacggagcacccgggcaccacccgggatgtgatcgacgtggccgcccag
tgggcggacctgcccctgcacctcctcgatacggcgggcctccgggagagccaggatccg
gtggagcgcctcggggtggcccgggtgggggaggagctggcccgggccgacctgatcctg
cacctggtgcccctggccgacgcggcgcccgacccggccgtggaggcccacctggccccc
tacgccgccaaggtcctgcgggtgcgcacccaggcggacctgggcggagcgccggatccc
ggcgccccctgcgtcagcgccgcgaccggggatctggccgccctggcggaggccctgcgg
acccgcttcctgggggcctggtcccccgacgcctgcctgggggccctggacacccggcgg
cagcgggagctgctggacgagctcgccgcccaggcggacctcctgaccggcctggacccc
gccacgcccccggagatcgccgcctccctcctccagggcgcctggagcctcctggcccgc
ctcacgggggaggatcgcgccgagacggccctggaccaggtcttcagcgggttctgcctg
ggcaagtga
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