Methanolobus sediminis: RE474_00525
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Entry
RE474_00525 CDS
T09570
Name
(GenBank) DUF5814 domain-containing protein
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mseb
Methanolobus sediminis
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mseb03019
]
RE474_00525
Messenger RNA biogenesis [BR:
mseb03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
RE474_00525
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
MGP3_C
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
WMW25236
UniProt:
A0AA51UKI3
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Position
complement(104745..107222)
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AA seq
825 aa
AA seq
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MTLWILASPERSKIIILPIRDKKKVPLFVGELILRHTDAGPRPHKFKVKSDGKGEYRPPS
EFIDLLRIADRIMIAKGGDEKQTAEFVEMLQGFQLSADVVNACRFCLLKNRFNFLNRRSI
KYHRDKICEDCAREELNRMLKSSQVNYADEACQRFEEIMLQTKDLDRTMAMVSPEDLDRE
LTRFDSIAANTEVPTGKIKDLPLHKSFKNILLAKSETLLPVQSLSIENGLLKGQNQLVTS
VTATGKTLIAELAGIENILRGKGRMLYLVPLVALANQKYDQFTKRYSPIGLKTSIRVGSA
RIKTAKNASMKRTLDSEIIVGTYEGLDYLLRTGSADLLGKIGTVIIDEVHTIEDSERGHR
LDGVIGRLKYVAPGAQFIYLSATVAKPKLRAKQFDARLVEYEYRPVPIERHLILCPEHSK
NKIMTRLVREEYATTSSKGHKGQTIIFTNSRRNCHRIAEALPIFAAPYHAGLTSQERKKT
EIAFLKGKLPVVVTTAALAAGVDFPASQVIFESLAMGIEWLTMQDFLQMLGRAGRPDYHD
RGEVVLLAVPNKKYSGDKGDTEDAVALKLLKGEMEHTKVEYGEDEQLEETLASVAVTSSK
KDLEKIHSSMLADFNVDYLLGKLAKNKFIHKKGDFVSLTKFGKIAAGHFLSVSKAFLIRD
SVLVEQDPIVTVSNLEFFDSVYYKYANRISSALNVNLPSRVFQGASLDILFEGENMDKLD
ITLRDQLFEFAADFLTCNCRDSPYCGCAERKFSEKIISIRAEGYEPEAIVKKLEHLYGVT
AYPGDVLGYLDNVVRNLEAVEMIAGAYSKRDLSARAKSLRKLVEG
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgacactctggatacttgcaagccctgaaaggtcaaagataattattttaccgatacgg
gataagaaaaaggttcctctttttgtcggtgaactcatcctgaggcatactgatgcaggc
ccgcgccctcataaattcaaggtaaaaagtgatggcaaaggagaatacaggccaccttcc
gaattcattgatcttttaaggatcgctgaccgcatcatgatagcaaaaggcggtgatgag
aaacaaacagcagagtttgttgaaatgctccagggattccagctcagtgcagatgtcgtt
aatgcctgcaggttctgccttttgaagaacaggttcaatttcctgaaccggcgttccatt
aaatatcacagggacaagatatgcgaagactgtgccagggaagaacttaacaggatgtta
aaaagttcccaggtcaattatgctgatgaggcatgccagagattcgaagagataatgctc
cagacaaaggatcttgaccgtacgatggctatggtaagtcctgaagaccttgatcgtgag
ctcacaaggttcgattccattgcagcaaacacagaggttcctacagggaaaattaaggat
ctgcctctgcataagagtttcaagaatatattgctggcaaaatcagaaactcttctgccg
gttcagtcgctatccatagagaatggtcttttaaaaggtcagaaccagcttgtaacttcc
gtgacagctaccggaaagacactgatagcagaacttgcgggtattgagaatatactgcgt
ggtaaaggacgtatgctttatcttgtgccccttgttgctcttgcaaaccagaaatacgac
cagttcacaaaacgttattctccaataggtttaaagacatccatcagggttggcagtgcg
cgaattaagactgcaaagaatgcttccatgaagagaaccctggattcagagatcattgtg
ggaacgtatgaaggattggattatttgctcaggaccggcagtgctgacctgttaggaaag
attggtactgtgatcattgacgaggtgcataccattgaggattctgaaagaggacaccgg
cttgatggtgttattggaaggttgaaatatgttgcaccaggtgcccagttcatctatctg
tctgctaccgttgcaaagccgaagttgcgcgcaaagcagtttgacgcaagactggtggag
tatgagtaccgtccggtgccaatagaaagacatctcattctgtgccctgaacattccaag
aacaagataatgacccggcttgtgagggaagaatatgccaccacctcatcaaaagggcac
aaaggacaaaccattatctttacaaattcaagaaggaactgccatcgtatagctgaagca
cttccgatatttgctgctccttaccatgccggtcttacaagtcaggaacgaaaaaagacc
gagatagcattcctcaaaggaaaactgcctgtggtggttacaactgctgcacttgctgcc
ggagttgatttccctgcatcacaggtgatatttgaatcccttgcaatgggtatcgaatgg
cttacaatgcaggacttcctccagatgctcgggcgtgcaggaaggccggattaccatgat
cgtggagaggttgtgctgcttgcagttcccaataagaaatactcaggtgataaaggtgac
accgaggatgctgttgccctgaaactgcttaaaggtgagatggaacacacaaaagtcgag
tacggggaagatgaacagcttgaagagactcttgcttcggttgctgtgacttcatcaaag
aaagacctggagaagatccattcatctatgctggcagattttaatgtggattatctgctt
ggaaagcttgctaagaataaattcattcataaaaaaggagattttgtgtctctaactaaa
tttggtaagatagcagcagggcatttcctgtcggtttcgaaggcgttccttatacgagat
tctgttcttgtggagcaggaccctattgttacggtttccaatctcgaattctttgattcg
gtttattacaaatacgcgaatcgtatttcttcggctcttaatgtgaaccttccttccagg
gtattccagggtgcttctctggatattctttttgaaggagagaacatggataaactggat
attaccctgcgagaccagttgttcgagtttgcggctgatttccttacctgcaattgtcgt
gattctccgtattgtggctgtgcggagcgcaagttctctgagaagataatttctatcagg
gctgaaggatatgaaccggaggccattgtaaagaaactcgaacatctttatggtgttacg
gcttatccgggtgatgtactcggatatcttgacaatgtagtgcgtaaccttgaggctgtt
gagatgatagccggggcttattcaaagcgtgatctttcggcaagggctaagagtttgaga
aagctggttgagggatga
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