Methanolobus sediminis: RE474_02065
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Entry
RE474_02065 CDS
T09570
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mseb
Methanolobus sediminis
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mseb03016
]
RE474_02065 (endA)
Enzymes [BR:
mseb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
RE474_02065 (endA)
Transfer RNA biogenesis [BR:
mseb03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
RE474_02065 (endA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
WMW25528
UniProt:
A0AA51YME8
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All DBs
Position
456978..458036
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AA seq
352 aa
AA seq
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MIGKLVKEKVKSGKQAINELYNTGYYGRPKGEVLELTLVEAAYLIYKNKLEITLDEKNLG
FEEFFTEASKRQQFFELKYIVYKDLRERGYYVQPSVTDFRVYPRGSHPGKTQAKMFVYVR
SERVPMQLKDLLAQYNAALNVRKQMILAIVDEESDITYYEVKRLDIKGEMEQILPMEKPV
SVTMLEDRVLVWDGETSRLLYENGFYGKPLDNERLQLSLVESAYLLEKGIIEIKNSNNEI
IPDISEFTEIAASIDPDFKRKYNTYVDLRSRGFVPKTGFKFGTHFRVYSEVYSTDKLPHS
NYLIHAIPHDHEFLLPVMSRAIRLANSVRKQMLYAVEFADAIEYIDIGRIKM
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttgatcggaaaactagtcaaagaaaaggtaaaatccggaaagcaggccatcaacgagctt
tacaacaccggatactatggtcgtcctaagggcgaggttcttgagcttacacttgttgaa
gccgcatatctgatttacaagaacaagctcgagataactctggatgaaaagaaccttggg
tttgaagagtttttcaccgaagcatctaaaagacagcagttctttgaactgaaatacatc
gtttataaagacctccgtgaaagaggctactatgtccagcccagtgtaactgacttcagg
gtatatccaagaggcagtcatcccggcaaaacacaggcaaagatgttcgtttacgtcagg
tcagaacgtgtgccaatgcagctgaaagatctgcttgcccagtataatgctgcacttaac
gttcgcaaacaaatgattcttgccatcgttgacgaggaaagtgacatcacatattacgaa
gtaaaaagactggacataaaaggagaaatggaacagattctccctatggaaaaacctgta
tctgttacgatgcttgaagaccgcgttcttgtctgggacggcgaaacatccaggcttctt
tatgagaacggcttttacggtaaaccacttgacaacgaacgccttcaactgtcacttgtg
gagtctgcataccttcttgaaaaaggcattatcgagataaagaacagcaataatgaaatt
attcctgatatatcagaattcacagaaattgcagcttcaattgatccggatttcaaacgc
aagtacaatacttatgtagacctgcgtagcagaggatttgtaccgaagaccgggtttaag
ttcggaacgcatttcagggtttacagcgaggtgtattcaactgataagctccctcactca
aactacctgatacatgcaataccgcatgatcatgaattcttactccctgtgatgtccaga
gcaatcaggcttgcaaacagtgtcagaaaacagatgctctatgcagtagaatttgctgat
gctatcgagtacatcgatattggcagaataaagatgtga
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