Methanolobus sediminis: RE474_02515
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Entry
RE474_02515 CDS
T09570
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mseb
Methanolobus sediminis
Pathway
mseb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RE474_02515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mseb03021
]
RE474_02515
Transcription machinery [BR:
mseb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
RE474_02515
Prokaryotic type
Archaeal type
TFB
RE474_02515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_LysW
Lar_restr_allev
DUF7577
A2L_zn_ribbon
Cas12f1-like_TNB
Ribosomal_S27e
Zn_ribbon_3
Zn_ribbon_PaaD
BRF2-like_C_cyclin_rpt
HTH_Tnp_ISL3
Zn_ribbon_IS1595
DZR
HTH_AsnC-type
Trm112p
HypA
DUF5795
Zn_ribbon_Elf1
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WMW25615
UniProt:
A0AA51YJJ3
LinkDB
All DBs
Position
558885..559898
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AA seq
337 aa
AA seq
DB search
MVEVERVRYSDTSEREKIRAMIKARKEKDKSAEVEKAKVQCPECGSRNLVQDYERAELVC
SDCGLVVDAEFVDEGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKS
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRTVRETAAVVYRKA
VDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIGEVSRVSRKEIGRTYRFISRELSLK
LMPTSPIDYVPRFCSGLNLKGEVQSRGVEILRQASEKELTSGRGPTGVAAAAIYIASILC
GERRTQREVADVAGVTEVTIRNRYKELAEELDIEIIL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaagtagaaagggtacgatattccgatacttccgaaagggagaagatacgtgca
atgatcaaagcacgtaaagagaaagataagagcgctgaagttgaaaaagcaaaagtccag
tgtcctgagtgtggcagccgcaacctcgtacaggactacgagagagctgaactcgtatgt
tctgactgtggacttgttgttgacgcagaattcgttgatgaaggaccagaatggcgtgct
ttcgatcatgaccagaggatgaagcgttcccgtgtgggtgcaccaatgacctacacgatc
cacgacaaaggtctgtccacaatgatcgactggagaaaccgtgactcatacggtaaatcc
atttcatcaaagaacagggcacagctttacaggttgagaaaatggcagcgtaggataaga
gtaagtaacgctacggaaaggaaccttgcgttcgctctgtctgaacttgaccgtatggca
tcagctcttggtctgccaagaactgtacgtgaaaccgccgctgtagtttacaggaaggca
gttgacaagaacctcatccgtggaaggagtattgaaggtgttgcagcagcagcattgtat
gcagcatgccgccagtgcagtgttccaagaacacttgacgagataggagaagtatcaagg
gtaagcagaaaagagattggaaggacataccgcttcatctcaagagagctttcactgaaa
ctcatgccaacatcaccaatagactacgtaccaaggttctgttcaggacttaaccttaaa
ggtgaagtacagtccagaggtgtggagattctcaggcaggcttccgagaaggagcttacc
agtggccgtggcccaaccggtgtagcagcagctgcaatctacattgcatcaattctttgt
ggcgagcgccgtacacagcgtgaggtcgccgatgttgcaggtgtaacagaagttaccatc
cgtaacaggtacaaagagcttgctgaagagcttgacattgagatcattctctaa
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