Methanolobus sediminis: RE474_02785
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Entry
RE474_02785 CDS
T09570
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mseb
Methanolobus sediminis
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mseb03032
]
RE474_02785
03400 DNA repair and recombination proteins [BR:
mseb03400
]
RE474_02785
Enzymes [BR:
mseb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RE474_02785
DNA replication proteins [BR:
mseb03032
]
Prokaryotic type
DNA Topoisomerases
RE474_02785
DNA repair and recombination proteins [BR:
mseb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RE474_02785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
RAD51D_N
Cdd1
IMS_HHH
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
WMW25667
UniProt:
A0AA51ULV8
LinkDB
All DBs
Position
complement(615999..618242)
Genome browser
AA seq
747 aa
AA seq
DB search
MHLIIAEKHIAAKRIAAILASEKIKQVRVSGVDTYEYESEEGKKVFIGLSGHIVKLDFPK
AYNNWQKVEANELVGAEIITASTQVKIVSALKKLGKEATKVTIATDYDREGELIGAEALD
IIKQVNPDIVFDRVHYSAITPKAIDAAFSNPTNVDFNLADAGHSRQVIDLVWGASLTRYI
SLAAGRLGKMFLSVGRVQSPTLALIVEREKEREAFVPRPYWELSAMLKSKSGEEFKVEHR
TKRFWEKADVDAAMEKISIGDNATVTELTTSEKIDKPPTPFNTTEFISAASSIGFTAANA
MRIAETLYTNGFISYPRTDNTVYPDTIDLRAQIEIFKTGAFKQYALKLLEKKELVPTKGK
KETTDHPPIFPASLAKKSEMNEQEWKLYEMVVRRFFATFADPAKWETIKSKYDINGEEFK
ANGARLVEPGWRWYYHYNAPEDRLLPKMEEGDVHSVIKADVEAKETQPPGRYGQGRLIKI
MEELGLGTKATRHDIISKLYSRAYVHGNPLQPTKTAVAVVDTLEKFAPTISKPDMTSKLE
ADMDRIAEGGIPEDEVLNESREMLELVFDELGKNKDDISESLRAGLREDKIIGVCSECGS
NLMVMRSKRGGRFIGCEGYPDCTFSLPLPKMGQVVVTDKLCEEHGLYHIRIINAGKRPWN
LGCPQCNFIEWQKTQEEEKLKQKEESSDKEKPKTLNDISGIGKVTAEKLADAGICSVDDL
CEADALELAKVTSIPVKKIKVWQSDIA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcatcatagcagaaaagcacattgcagcaaaaagaatagccgcaattctggca
tcagaaaaaataaaacaggttcgtgtaagtggggtagacacttacgaatacgaatccgaa
gaaggaaaaaaggtattcataggtcttagcggtcatattgtaaaactggatttccctaaa
gcatataacaactggcagaaggtagaggcaaatgaacttgttggagcagagataatcaca
gcttcaactcaggtaaagatcgtatcagcacttaaaaagcttggaaaggaagctacaaaa
gtcaccattgcaactgactatgacagggaaggagaactcattggagctgaagctcttgat
atcatcaagcaggtaaatccggatattgtttttgatcgtgtacattacagtgccattact
cccaaagcgatcgatgctgcgttttctaatcctacaaacgtggatttcaatcttgcagat
gccggtcattcccgccaggtcattgatcttgtatggggtgcatcgctcactcgttatatc
tcacttgcagccggacgtttaggaaagatgttcctgtcagttggcagggtccagtcccca
acacttgcgcttatcgttgaacgtgaaaaggaaagggaagcatttgtccccaggccatat
tgggaactttcagccatgcttaagagcaaaagcggtgaagagttcaaggttgaacaccgt
acaaagaggttctgggaaaaggcagatgtcgatgctgcaatggaaaagatctccattggt
gacaatgccacagtgacagaactgacaacttccgaaaagatagacaaaccaccaacgcct
tttaacactactgaatttatcagcgcagcgagttcaattggctttaccgcagctaatgcc
atgaggatcgctgagacactttacactaacggttttatctcatatccaaggacagacaac
acagtttatcctgacactattgacctgagggcacagatagagatattcaagacaggggca
ttcaaacaatatgctctcaagttacttgagaagaaagaacttgttcctacaaagggtaag
aaagaaacaacagaccacccaccaatattccctgcatcccttgccaagaaatccgagatg
aacgagcaggaatggaagctttacgaaatggttgtcaggcgtttctttgcaacttttgcc
gaccctgcaaaatgggagaccatcaagtcgaaatatgatatcaatggcgaggagttcaag
gcaaacggtgcaaggcttgtggaacccggatggagatggtactatcattacaacgcaccg
gaggacaggctgcttccaaaaatggaagaaggggatgttcattccgtaatcaaggcagat
gttgaggcaaaggaaacacaaccaccaggaagatacggtcagggcaggctcatcaagatt
atggaagagctgggacttggtacaaaggccacgcgtcacgatattatcagtaagctttac
tcaagggcttatgtacatggaaacccgctgcaacctacaaaaactgctgttgcagttgtg
gatacgcttgagaagttcgcacctactatatccaaacctgatatgacaagtaaacttgaa
gctgatatggacaggatagctgaaggcggaataccggaggatgaagtcctgaatgaatcc
agggaaatgctggagcttgtttttgatgagcttggaaagaacaaggatgacatcagtgag
tcactccgcgctggtttgcgtgaggacaagataattggtgtttgttctgaatgcggttca
aatctaatggtaatgagatcaaaacgaggagggcgcttcataggttgtgaaggctatccg
gattgtacgttctcactaccgcttccaaagatgggacaggttgttgtcacagacaaatta
tgtgaggaacatggcctgtatcacatacgtatcattaatgctggaaagaggccatggaac
cttggctgcccgcaatgtaatttcattgagtggcaaaagacacaggaagaagagaaacta
aagcagaaagaagaatcttctgataaggaaaagccaaagaccctgaatgacatatcaggt
attggtaaggtcaccgcggaaaaacttgcagatgctggaatctgcagtgttgatgatctg
tgtgaagctgatgcactggaacttgcaaaagttacaagtatacctgtaaagaaaataaaa
gtatggcaatctgatattgcctga
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