Methanolobus sediminis: RE474_03055
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Entry
RE474_03055 CDS
T09570
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mseb
Methanolobus sediminis
Pathway
mseb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RE474_03055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mseb03021
]
RE474_03055
Enzymes [BR:
mseb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RE474_03055
Transcription machinery [BR:
mseb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
RE474_03055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
WMW25716
UniProt:
A0AA51ULD5
LinkDB
All DBs
Position
672274..674919
Genome browser
AA seq
881 aa
AA seq
DB search
MHNDIPSIPKRVGAIKFGLLSPKEVRKMSVTAIITADTYDDDGYPIDMGLMDLRLGVIDP
GLKCKTCGSRAGECPGHFGHIDLVAPVIHVGFNKTIRKTLRSVCRNCSRLLLDASKKQEF
LDQLRTCKDMGHLPDDIINEVFKEARKSKTCPYCSTEQLEIKFEKPSDYVEDGHKLTPTE
IRDRFENIPDEDVKVLGMDPSSARPEWMILTVLPVPPVTVRPSITLESGQRSEDDLTHKL
VDIIRINQRFQENRDAGAPQLIIEDLWELLQYHVTTFFDNEVSGVPPARHRSGRPLKTLT
QRLKGKEGRFRGSLSGKRVNFSARTVVSPDPNLSINELGVPFAMAMQMTIPEKVTTRNIE
LLRMYVQRGSEVHPGANYAIRDDGRRIRVSEINKEELAEKIEVGWTVERQLMDGDIVLFN
RQPSLHKMSIMAHRVKVLPFKTFRLNPAVCAPYNADFDGDEMNMHVLQTEESRAEASILM
QVQENILSPRFGGPIIGGIHDHISGLFLLTRNENAITKNAALELLRKSDIRDLPEPASYS
ENGEPLWNGKQIFSQILPKGLYLEFPAQACFKCDTCKKRDCEYNAYVVIEDGEMLQGTID
EQSIGAFKGKILDKVVKEYSPEAGAKFVDDFTRLAIRGVMKTGLSFGISDEDIPPTAKIQ
IGNLLSEAEDKVQKLIEAYEAKELEPLPGRTLDETIEMKIMQELGKARDQTGNIAGKQLG
LENSAVLMAKSGARGSMLNLTQMAACVGQQAVRGERIRRGYAGRTLPHFDKGDLGADAHG
FVKASYKSGLNPTEYFFHAIGGREGLVDTAVRTSQSGYLQRRLVNALQDLEVQYDGSVRE
TRGVIVQFKYGEDGIDSTKSDYSKPEAIHRIVRRVTGKEVN
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgcataatgatattccatcaattccaaaaagggttggcgcaattaaattcggtctgctc
tctcctaaagaagtaaggaagatgagtgtaacagcaattatcaccgctgacacctacgac
gacgacggttatccaattgacatgggtcttatggaccttcgtcttggagttatcgaccct
ggtcttaaatgtaagacctgtggcagccgtgcaggagaatgtccgggacacttcggacac
atcgaccttgtggcaccggtcatacacgtaggttttaacaagacaatacgcaagacactg
cgttcagtatgccgcaactgtagcaggcttctccttgatgcaagtaagaaacaggagttc
cttgaccagttaagaacttgcaaggacatgggacaccttccagacgatatcatcaacgaa
gtattcaaggaagcacgcaagtcaaagacctgcccatactgttcaaccgaacagcttgag
atcaagttcgaaaaaccaagcgactatgtagaagatggccacaagctcactccaaccgag
atccgcgaccgctttgagaacattcctgatgaggatgtaaaagttcttggcatggaccct
tcaagtgcaaggcctgaatggatgatcctcacagttcttccagtaccaccggtaactgtc
agaccttcaattacacttgaatccggccagcgcagtgaagatgacctgacccacaagctt
gtagatattattagaattaaccagagattccaggagaacagggatgctggtgcgccacag
cttattattgaagacctgtgggaattgctccagtaccatgttacgacattcttcgacaat
gaagtatcaggcgtacctcctgcaagacacagatcaggaagacctctcaagaccctcaca
cagcgtcttaagggtaaggaaggacgtttcagaggaagtttgtccggtaagcgtgttaac
ttctcagcacgtaccgtagtttcacctgatccaaaccttagtatcaatgaattaggcgtt
ccttttgcaatggcaatgcagatgacaattcctgagaaggtcacaacaagaaacattgag
cttctccgcatgtacgtacagcgtggcagcgaagttcaccctggtgcaaactatgcaatc
cgtgatgatggaaggcgtatcagagtttctgaaattaacaaggaagaacttgcagagaag
atagaagtcggatggactgttgaaagacagctcatggacggcgacattgttctctttaac
aggcagccttcacttcacaagatgagtatcatggcccacagggtaaaggtacttccattc
aagacattcagacttaacccggcagtatgtgcaccatacaacgctgactttgacggtgac
gaaatgaacatgcacgttctgcagaccgaagagtcaagggcagaggccagcatccttatg
caggttcaggagaacatcctgtccccacgtttcggcggaccaattatcggtggtatacat
gaccacatctcaggtcttttcctgcttacaaggaacgagaatgccatcacaaagaatgca
gctcttgaactgctcaggaaatctgacatcagagacctgccggaacctgcaagttactca
gagaacggagaaccactgtggaacggtaagcagatcttcagtcagatccttcctaaagga
ctttacctggaattccctgcacaggcttgttttaagtgtgacacctgtaagaagagggac
tgtgaatacaatgcatatgttgtcatagaagatggagagatgctccagggtactattgac
gaacagtccattggtgcattcaaaggaaagatcctcgataaggtagtaaaggaatacagc
ccagaagcaggagctaaattcgtagatgactttaccagacttgctatccgtggtgtgatg
aaaacaggtcttagtttcggtatcagtgatgaagacataccacctactgcaaagatccag
ataggaaatctcctgagtgaagctgaagataaagtgcagaaactcattgaagcctacgag
gcaaaggaacttgaaccattgccaggacgtacactcgatgaaaccattgaaatgaagatc
atgcaggaacttggtaaagccagagaccagaccggtaacattgccggtaagcaactgggt
cttgagaactctgcggtgctcatggcaaagtcaggagcaagaggttcaatgcttaacctt
acccagatggcagcctgtgtcggacaacaggcggttcgtggtgaaaggatcagaagaggt
tatgcaggaaggacactcccacactttgacaagggtgaccttggtgcagatgcccacggg
ttcgtaaaggcaagttataagagcgggctgaacccgaccgaatacttcttccacgcaatt
ggtggtcgtgaaggtcttgtagatactgcggttcgtacttctcagtcaggttacctgcag
aggagacttgttaacgcattgcaggatcttgaagtccagtatgacggttctgtaagagaa
acacgtggtgtcattgtccagttcaaatacggagaagatggaattgactccacaaagagt
gactatagtaaacctgaagcgatccatcgtatcgtcaggagagtcaccggtaaggaggtg
aactaa
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