KEGG   Methanolobus sediminis: RE474_05665
Entry
RE474_05665       CDS       T09570                                 
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mseb  Methanolobus sediminis
Pathway
mseb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mseb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    RE474_05665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mseb03000]
    RE474_05665
   03021 Transcription machinery [BR:mseb03021]
    RE474_05665
Transcription factors [BR:mseb03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    RE474_05665
Transcription machinery [BR:mseb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     RE474_05665
  RNA polymerase III system
    TFIIIB
     RE474_05665
  RNA polymerase I system
    SL1/TIF-1B
     RE474_05665
SSDB
Motif
Pfam: TBP DUF3378 RTT107_BRCT_5
Other DBs
NCBI-ProteinID: WMW26199
UniProt: A0AA51UMA7
LinkDB
Position
complement(1167287..1167838)
AA seq 183 aa
MSDYNIKIENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVADVHTVIGNMAKKLNDIGIKTIEDPEITVQNIVASADLQAVLNLNAIAIG
LGLENIEYEPEQFPGLVYRIDDPKVVVLIFSSGKLVVTGGKSPENCEQGVEVVRQQLDSM
GLL
NT seq 552 nt   +upstreamnt  +downstreamnt
atgtcagattacaacatcaaaattgaaaatgtggtcgcatctaccaagcttgctgaggag
ttcgatcttacaaaaatagaagctgagttcgagggtgcagagtataataaacagaagttc
cctggtcttgtctaccgtgtttctgacccaaaagccgcatttcttgtattcacttccggt
aaagttgtatgtaccggtgcaaagaatgtcgctgatgttcacactgtcataggtaatatg
gccaagaagcttaatgacatcggcatcaagacaatcgaggatcctgagatcaccgttcag
aacattgttgcatcagcagaccttcaggcggtcctgaaccttaatgcaattgcaataggt
cttggtcttgagaatatcgagtatgagccagagcagttccctggtcttgtttatcgcatt
gacgatcctaaggtcgtagtacttattttcagttccggaaagcttgtagtcaccggcggt
aaatcacctgagaattgtgaacagggtgttgaagtcgtaagacagcagcttgacagcatg
ggtctgctttaa

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