Methanolobus sediminis: RE474_05665
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Entry
RE474_05665 CDS
T09570
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mseb
Methanolobus sediminis
Pathway
mseb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RE474_05665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mseb03000
]
RE474_05665
03021 Transcription machinery [BR:
mseb03021
]
RE474_05665
Transcription factors [BR:
mseb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
RE474_05665
Transcription machinery [BR:
mseb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
RE474_05665
RNA polymerase III system
TFIIIB
RE474_05665
RNA polymerase I system
SL1/TIF-1B
RE474_05665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
WMW26199
UniProt:
A0AA51UMA7
LinkDB
All DBs
Position
complement(1167287..1167838)
Genome browser
AA seq
183 aa
AA seq
DB search
MSDYNIKIENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVADVHTVIGNMAKKLNDIGIKTIEDPEITVQNIVASADLQAVLNLNAIAIG
LGLENIEYEPEQFPGLVYRIDDPKVVVLIFSSGKLVVTGGKSPENCEQGVEVVRQQLDSM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattacaacatcaaaattgaaaatgtggtcgcatctaccaagcttgctgaggag
ttcgatcttacaaaaatagaagctgagttcgagggtgcagagtataataaacagaagttc
cctggtcttgtctaccgtgtttctgacccaaaagccgcatttcttgtattcacttccggt
aaagttgtatgtaccggtgcaaagaatgtcgctgatgttcacactgtcataggtaatatg
gccaagaagcttaatgacatcggcatcaagacaatcgaggatcctgagatcaccgttcag
aacattgttgcatcagcagaccttcaggcggtcctgaaccttaatgcaattgcaataggt
cttggtcttgagaatatcgagtatgagccagagcagttccctggtcttgtttatcgcatt
gacgatcctaaggtcgtagtacttattttcagttccggaaagcttgtagtcaccggcggt
aaatcacctgagaattgtgaacagggtgttgaagtcgtaagacagcagcttgacagcatg
ggtctgctttaa
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