Methanolobus sediminis: RE474_05680
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Entry
RE474_05680 CDS
T09570
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
mseb
Methanolobus sediminis
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mseb03036
]
RE474_05680 (smc)
Chromosome and associated proteins [BR:
mseb03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RE474_05680 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Fez1
TolA_bind_tri
Sec10_N
Motif
Other DBs
NCBI-ProteinID:
WMW26202
UniProt:
A0AA51YMS7
LinkDB
All DBs
Position
complement(1169957..1173481)
Genome browser
AA seq
1174 aa
AA seq
DB search
MHIKELEFINFKSFGKKVKIPFFDGFTTISGPNGSGKSNIIDGILFVLGLSSSRTLRAEK
LTDLIYNGEGSKKPDFAQVTIRFDNVDREMPFDADEISITRKIRETDSGYYSYFYFNGKA
VSLTDVHNYLAKARVTPEGYNVVMQGDVTRIINMTAGERRKIIDEIAGVAEFDSKRDRAL
SELEIVRERVERVDIIIEEVGQQLEKLKTERDQALKYQSLKEEKMKFEGFVLLAKLKDAK
VELTNVADDILAKEEVLAKLEVDLEAKRVAVDKLEQELEEMTLNIQRMGEDEQIQIKKDI
EGIRGEVSRCMDTIEISEKEMEDVESRRRKAFVEIDEIKGKLEELDSKISEETMRKESIL
AEMSERKTERMLLQSKIADVDAKFAQTRDELSKLKSRLEAVKNEKNELMRQEDRLLDAQR
RKSVEARDIESEIADAKSKAESSGSDTKSVEYDIDKLNEKIDALTKDMDDLEFSRSQLKV
IVKEFEDELRKHENDYARIEVRVRAAEDHSKYSKAVDMVMNEKKHHGLPGIYGTIAELGS
VDQKYSNALGIAAGGRMQAVVVENDEDAARAISFLKQRRGGRATFLPLNKMESRRPYKDL
SDREGVIGYAIDLIDFDNKFEAAFWYVFRDTLIVDTLTNARRLMGGLRMVTLEGEVIEKS
GAMVGGSQQQQSGLSFAASEKDKLVRIAEQITELDSKRSNAIKKLDQVEGHIAQINREIH
EHDKEISKKQMQLEEIEGRGERLEQLIEAKSHELAEIEEARKQLRVEMDATLTKKQEQEE
LVVSLEKDIEVLEEKLEGSEVPELNRQAEQLDEEIRRLDGRVRDIESTLNALNLDRNYAS
NKIEENRELIKSMDEKKSTHKQRVSELKNKIAELEESLKEKQQREMELADELKELQQERA
RMHDEHVALKKEFDKFKGRFDEGNRQMMALNATKEALDEQVNDLAEEIQRRGIEETEEVP
NYETVRTRIASIERAMERLEPVNMRAIDEYDEVEARLDELVSRRDTLSSEREQILERIKQ
YEQLKKDTFMETYNGINEPFKEIFHELSDGIGELVLDNYEDPFAGGLTLKAQPKEKTLQR
LEAMSGGEKSLTALSFVFAIQQYRPAPFYAFDEIDMFLDGANAGRVAQRVKKAVKNAQFI
VVSLRKPMIEAAERTIGVAMQENNITSITGVKLR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
gtgcatatcaaggaacttgagtttataaacttcaaatccttcgggaaaaaggtaaaaata
cctttttttgatggtttcaccactatttccggccctaatggtagtggtaagtctaacata
atagacggtattctctttgtgctgggtctttcaagttccagaaccctgagagccgaaaag
ctcaccgatctcatatacaatggagaaggctctaaaaaacctgattttgcccaggttacc
attcgttttgacaatgttgatcgtgaaatgccttttgatgctgatgagatctcgatcaca
aggaagattagggaaactgattccggttattacagttatttctatttcaacggtaaggct
gtaagccttactgatgttcacaattatcttgcaaaggcccgtgtaactcctgaaggatac
aacgttgtgatgcagggagatgtcacccgtatcatcaacatgacagccggtgagagacgt
aagattatagacgagattgccggtgttgctgaatttgacagcaagagagacagggcactc
agcgaacttgagatcgtgcgtgagagagttgaaagagtcgacattatcattgaagaggtt
ggtcagcagcttgaaaagctaaagacagaacgtgaccaggctctcaaataccagtctctc
aaagaagagaaaatgaagtttgaaggcttcgttttgctggcaaagctgaaggatgccaag
gttgaactcacaaatgttgctgacgatattcttgcaaaagaagaagtccttgccaaactt
gaagttgacctcgaggccaagagagttgctgtggataagctcgagcaggaacttgaggaa
atgaccctgaacatccagagaatgggtgaggatgagcagatccagatcaagaaggatata
gagggcatccgcggtgaagtttcaaggtgtatggacaccatcgagatctctgaaaaggag
atggaggatgtagaatccagaagaaggaaagcttttgtagagatcgatgagatcaaaggc
aagcttgaggaactggattctaagatttcagaagaaacaatgcgtaaggaaagtatcctt
gctgagatgtccgagcgcaaaactgaacgcatgcttctgcaaagtaagattgctgatgtt
gatgctaaatttgcccagacccgcgatgaattgagtaaactgaaatcccggctcgaagct
gtgaagaatgagaaaaatgaactcatgcgccaggaagaccgcctgcttgatgcccagagg
agaaagtctgttgaggcaagggacattgagagcgagatcgcagatgcgaagtcaaaagca
gaatcttcaggtagcgacacaaaatccgtagaatatgatattgataaactcaatgagaag
atcgatgccctgaccaaggacatggatgatcttgagttctcacgttcccagttaaaagtt
attgtaaaggaatttgaggacgagcttcgaaaacatgagaatgattatgcaaggatcgag
gttcgtgtcagggcagcagaggaccacagtaagtattccaaagcagttgacatggtgatg
aatgagaaaaaacaccatggtcttccaggtatttacgggacgattgcagagcttggcagt
gttgaccagaagtattccaatgcgctgggaattgcagccggtggacgtatgcaggctgta
gtggttgagaatgatgaggacgctgcaagagcgatctctttcctgaagcagaggcgtggt
ggtagggcaactttccttccactgaataaaatggaatcccgcaggccgtacaaggacctt
tctgatagggaaggtgtgattggctatgcaattgaccttattgattttgataacaaattt
gaagctgctttctggtatgttttcagggatacacttattgttgataccttgacgaatgca
cgtcgcttaatgggtggcctgcgaatggttactcttgaaggtgaagtcattgagaagagc
ggtgcaatggttggaggttcccagcagcagcagtccggtctttcctttgccgcatctgaa
aaggataaacttgtgagaatagctgaacagatcaccgaacttgattccaaacgcagcaac
gcaatcaagaaactggatcaggttgaagggcacattgctcagatcaatcgtgagattcac
gagcacgataaggaaatctccaagaagcagatgcagcttgaggagatcgaaggtaggggc
gagcgtcttgaacagctcattgaggctaagagccacgaacttgcagagatcgaggaagcc
cgcaagcagctaagagttgagatggatgccacactcacaaagaagcaggagcaggaagaa
cttgtggtttcgcttgaaaaggacattgaggtcctggaagaaaaacttgaaggttcagag
gttcctgaactcaacaggcaggctgagcagcttgatgaggagatcaggcgtctggatggt
cgtgtaagggatattgaatccactcttaatgcactgaaccttgaccgcaattatgcatct
aataagatcgaagagaacagggaactcatcaagtccatggatgagaagaagagcactcat
aagcagcgtgtctctgagctaaagaataagatcgctgaacttgaggaatctctcaaggag
aaacagcagcgtgaaatggaacttgctgatgagctcaaggagttgcagcaggaacgtgcc
cgcatgcatgatgagcatgttgcattgaagaaggaattcgacaagttcaagggcaggttc
gatgagggcaacaggcagatgatggctcttaatgcaacaaaggaagccctcgatgagcag
gtaaatgatcttgccgaagagattcagaggcgtggtatagaggaaacagaagaagttcct
aattatgagactgtgcgcacaaggatagcttctattgaaagggcaatggagcgccttgaa
cctgtgaacatgcgtgcaattgatgaatatgatgaagttgaagcaagacttgacgagctt
gtaagcaggcgtgatactctctcatctgaaagggagcagattcttgagcgtataaaacag
tacgagcagctcaaaaaagacactttcatggaaacttacaatggtatcaatgagccattt
aaggaaatattccacgagctttccgatggaataggtgagcttgttcttgataattatgaa
gacccatttgcaggtggtcttacactgaaggcacagccaaaggaaaagacactgcagcgt
cttgaagcgatgtcaggaggagagaagagtctgactgcgctttcatttgttttcgctatt
cagcagtacaggccggcgcctttctatgcattcgatgagattgacatgttccttgacgga
gcaaatgccggaagggttgcccagcgtgtgaaaaaggcagttaagaatgcacagttcatt
gttgtgtccctgagaaaaccaatgatcgaagctgcagagcgcacgataggtgttgcaatg
caggaaaataacattacaagtattacgggagtgaaattacgttga
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