Methanolobus sediminis: RE474_05955
Help
Entry
RE474_05955 CDS
T09570
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
mseb
Methanolobus sediminis
Pathway
mseb03030
DNA replication
mseb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RE474_05955 (fen)
03410 Base excision repair
RE474_05955 (fen)
03450 Non-homologous end-joining
RE474_05955 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mseb03032
]
RE474_05955 (fen)
03400 DNA repair and recombination proteins [BR:
mseb03400
]
RE474_05955 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mseb04147
]
RE474_05955 (fen)
DNA replication proteins [BR:
mseb03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
RE474_05955 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
RE474_05955 (fen)
DNA repair and recombination proteins [BR:
mseb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
RE474_05955 (fen)
Exosome [BR:
mseb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RE474_05955 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
HHH_2
RAMPs
Motif
Other DBs
NCBI-ProteinID:
WMW26254
UniProt:
A0AA51UMW0
LinkDB
All DBs
Position
complement(1235515..1236531)
Genome browser
AA seq
338 aa
AA seq
DB search
MGVDIGELLKRSTIEVSDLSLNVVAIDAFNTLYQFLSIIRQRDGTPLKDSQGNVTSHLSG
ILYRMTNIVEAGVKPVFVFDGKPPEFKSSTIQKRTERREKAKANYELAKEEGLAEEAYKY
AQASARVDATIVEDSKKLLSAMGIPYVDAPSEGEAQAAYMVKKGDADRIASQDYDSLLFG
SPKVVRNLTVSGKRKLPKKNIYVDVKPELIDLKENLDEMGINQSQLIDIALCVGTDYNDG
IEGVGPKTALKLVKEHGSIENILLEKGLEIENLEGIKEFFKSPPVTDDYSLKWKKPDSSA
VVSFLCGEHDFSEDRVTKALERLEASSGSGQSTLDKWF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttgatataggagagctcctaaaaaggagcacgatcgaagtatctgacctttct
ttaaacgttgtggcgatagacgcctttaatacactttatcaattcttaagtatcatccgg
cagagagatggcactcccctgaaagattctcagggaaatgtcacatcacatctgtccggc
attctttacaggatgaccaacatagttgaagccggagtaaaacctgtttttgttttcgat
ggcaagccccctgagttcaaatcatcgactatacagaaacgtactgaaagacgtgaaaaa
gcaaaagccaattatgaactggctaaagaagaaggtcttgctgaagaagcatataaatat
gcccaggcatctgctagggttgatgcaacaattgttgaggattcaaagaaactgctgagt
gcaatgggtattccttatgtggatgccccctcagaaggtgaagcacaggcagcttacatg
gtcaaaaaaggagatgctgacaggatagcatcacaggattacgattcactgcttttcggt
tctcctaaagttgtcaggaacctgacggtttcaggtaagagaaaattaccaaagaagaac
atctacgtggatgtcaaacctgaactcattgaccttaaagaaaacctggatgaaatggga
attaaccagtcacaacttatcgatattgctctttgtgtaggtaccgattataatgatggt
atcgagggtgttggtccaaagacagctctcaaactagtaaaagaacatggcagcatagag
aacatccttctggaaaaaggtctggaaatcgagaatcttgaaggaatcaaagagtttttc
aaatccccgccggtaaccgatgattattctcttaaatggaaaaagcctgattcctcagcg
gtagtatcatttctctgcggagaacatgatttctcagaggacagggttacaaaggctctg
gaacgcctcgaagcttcttccggaagcggccagagcacccttgacaaatggttctag
DBGET
integrated database retrieval system