KEGG   Methanolobus sediminis: RE474_05955
Entry
RE474_05955       CDS       T09570                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mseb  Methanolobus sediminis
Pathway
mseb03030  DNA replication
mseb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mseb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RE474_05955 (fen)
   03410 Base excision repair
    RE474_05955 (fen)
   03450 Non-homologous end-joining
    RE474_05955 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mseb03032]
    RE474_05955 (fen)
   03400 DNA repair and recombination proteins [BR:mseb03400]
    RE474_05955 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mseb04147]
    RE474_05955 (fen)
DNA replication proteins [BR:mseb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    RE474_05955 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     RE474_05955 (fen)
DNA repair and recombination proteins [BR:mseb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     RE474_05955 (fen)
Exosome [BR:mseb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   RE474_05955 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2 RAMPs
Other DBs
NCBI-ProteinID: WMW26254
UniProt: A0AA51UMW0
LinkDB
Position
complement(1235515..1236531)
AA seq 338 aa
MGVDIGELLKRSTIEVSDLSLNVVAIDAFNTLYQFLSIIRQRDGTPLKDSQGNVTSHLSG
ILYRMTNIVEAGVKPVFVFDGKPPEFKSSTIQKRTERREKAKANYELAKEEGLAEEAYKY
AQASARVDATIVEDSKKLLSAMGIPYVDAPSEGEAQAAYMVKKGDADRIASQDYDSLLFG
SPKVVRNLTVSGKRKLPKKNIYVDVKPELIDLKENLDEMGINQSQLIDIALCVGTDYNDG
IEGVGPKTALKLVKEHGSIENILLEKGLEIENLEGIKEFFKSPPVTDDYSLKWKKPDSSA
VVSFLCGEHDFSEDRVTKALERLEASSGSGQSTLDKWF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggtgttgatataggagagctcctaaaaaggagcacgatcgaagtatctgacctttct
ttaaacgttgtggcgatagacgcctttaatacactttatcaattcttaagtatcatccgg
cagagagatggcactcccctgaaagattctcagggaaatgtcacatcacatctgtccggc
attctttacaggatgaccaacatagttgaagccggagtaaaacctgtttttgttttcgat
ggcaagccccctgagttcaaatcatcgactatacagaaacgtactgaaagacgtgaaaaa
gcaaaagccaattatgaactggctaaagaagaaggtcttgctgaagaagcatataaatat
gcccaggcatctgctagggttgatgcaacaattgttgaggattcaaagaaactgctgagt
gcaatgggtattccttatgtggatgccccctcagaaggtgaagcacaggcagcttacatg
gtcaaaaaaggagatgctgacaggatagcatcacaggattacgattcactgcttttcggt
tctcctaaagttgtcaggaacctgacggtttcaggtaagagaaaattaccaaagaagaac
atctacgtggatgtcaaacctgaactcattgaccttaaagaaaacctggatgaaatggga
attaaccagtcacaacttatcgatattgctctttgtgtaggtaccgattataatgatggt
atcgagggtgttggtccaaagacagctctcaaactagtaaaagaacatggcagcatagag
aacatccttctggaaaaaggtctggaaatcgagaatcttgaaggaatcaaagagtttttc
aaatccccgccggtaaccgatgattattctcttaaatggaaaaagcctgattcctcagcg
gtagtatcatttctctgcggagaacatgatttctcagaggacagggttacaaaggctctg
gaacgcctcgaagcttcttccggaagcggccagagcacccttgacaaatggttctag

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