Methanolobus sediminis: RE474_06985
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Entry
RE474_06985 CDS
T09570
Name
(GenBank) OB-fold nucleic acid binding domain-containing protein
KO
K07466
replication factor A1
Organism
mseb
Methanolobus sediminis
Pathway
mseb03030
DNA replication
mseb03420
Nucleotide excision repair
mseb03430
Mismatch repair
mseb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RE474_06985
03420 Nucleotide excision repair
RE474_06985
03430 Mismatch repair
RE474_06985
03440 Homologous recombination
RE474_06985
03460 Fanconi anemia pathway
RE474_06985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mseb03000
]
RE474_06985
03032 DNA replication proteins [BR:
mseb03032
]
RE474_06985
03400 DNA repair and recombination proteins [BR:
mseb03400
]
RE474_06985
Transcription factors [BR:
mseb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
RE474_06985
DNA replication proteins [BR:
mseb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
RE474_06985
DNA repair and recombination proteins [BR:
mseb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
RE474_06985
MMR (mismatch excision repair)
RE474_06985
DSBR (double strand breaks repair)
HR (homologous recombination)
RE474_06985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
OB_Ssb-like
REPA_OB_2
SopD
Motif
Other DBs
NCBI-ProteinID:
WMW23856
UniProt:
A0AA51UHY5
LinkDB
All DBs
Position
complement(1449337..1450467)
Genome browser
AA seq
376 aa
AA seq
DB search
MDEINDIYEKLGGVISKDDFTRKVEEKVEQMSGLCDTRTAAMLVAHDLGVSDTGGEQQIQ
RISEITPNSGNVKLIAKVMTVYPAKEFNRNDGTVGRVANLIVADETGSIRLTLWDDRADL
VKSGEIEIGQTFQIAGYVKEGYSGVEVNVGNNGVFCESDEKVEARIESKQIKDITNGMGD
INLRARVLDISDIRTFNKRDGSTGKVANLLIGDETGKIRVTLWDELTDFTQQVEVDDSVE
IINAYARENNFNQQVEMQVGNRGTIKKIEEEVEFKESFTPISDIIPGESYSISGQVSGLG
EIREFNRDDGTVNMVSNIYVSDDTGRIRIALWGDHALLVDELDIDTNIDIIDAYSKSGFN
DEIELSAGNRTRINIH
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggacgagataaacgatatatatgaaaaactcggtggcgtcatcagcaaagatgacttt
acacgcaaggtggaagaaaaagtagagcagatgagcggactctgtgatacaagaacagca
gctatgctggttgcacatgaccttggagtcagtgatacaggcggagagcagcaaatacag
agaatctcagaaataacaccaaacagcggaaacgtgaagctcatagctaaagtaatgacc
gtttatcctgcaaaggaattcaacaggaacgatggtacagtcggcagggttgcaaacctt
attgttgctgatgagacaggatccatacgactcacattatgggatgacagggcagatctt
gtaaaaagtggcgagatagagatcggacagacattccagatagcaggatatgtaaaagaa
ggatactccggtgttgaggttaatgttggtaacaatggtgtattttgtgaaagtgatgaa
aaggtcgaagcacgtatcgagtctaagcagataaaagatataactaacggcatgggcgac
atcaacctgcgtgcaagggtacttgacatttctgacatcaggacattcaacaagagagat
ggcagtacaggtaaagttgcaaacctccttattggtgatgagaccggaaaaataagagtc
acactctgggatgaacttacagatttcacacaacaggtcgaagttgatgattctgttgag
atcatcaatgcctatgcaagagagaacaacttcaaccagcaggtggaaatgcaggttgga
aaccgcggaacaatcaaaaagatagaagaggaagtagaattcaaagaaagcttcactcca
atctctgacataattccaggtgaatcatattccatctcaggacaggtttccgggcttgga
gaaataagagaattcaatcgtgacgatggtacagtgaacatggtatccaacatatacgtt
tcagatgacactggtaggatacgcatagctctctggggtgaccatgcacttcttgttgat
gagcttgatatcgatacaaacattgacattatcgatgcatactcaaaatccgggttcaac
gatgagattgagctcagtgcaggaaaccgcacaaggattaacatccattaa
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