Methanolobus sediminis: RE474_07540
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Entry
RE474_07540 CDS
T09570
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mseb
Methanolobus sediminis
Pathway
mseb03022
Basal transcription factors
mseb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RE474_07540
09124 Replication and repair
03420 Nucleotide excision repair
RE474_07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mseb03021
]
RE474_07540
03036 Chromosome and associated proteins [BR:
mseb03036
]
RE474_07540
03400 DNA repair and recombination proteins [BR:
mseb03400
]
RE474_07540
Enzymes [BR:
mseb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
RE474_07540
Transcription machinery [BR:
mseb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
RE474_07540
Chromosome and associated proteins [BR:
mseb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
RE474_07540
DNA repair and recombination proteins [BR:
mseb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
RE474_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Zot
PhoH
AAA_34
ATPase
TIP49
Motif
Other DBs
NCBI-ProteinID:
WMW23956
UniProt:
A0AA51UKE6
LinkDB
All DBs
Position
1569124..1571304
Genome browser
AA seq
726 aa
AA seq
DB search
MSGKTGYMKYFPKETCYPNQQDAMDKIHASLINKEIILFEGACGTGKTLSALAPSLNVGK
QLQKTVIIATNVHQQMVQFINEAREIKQTNDLKVAVVKGKATMCPNETDYEECRLKRENT
FELLETERELALKKQEMKSAYENYKKSKDPALVALRDALSKELDVAEEKSKELRKRSCNY
LYEVLRYDGEAFRQWLFDDVRTPEEVNDYAFQKGMCGYELLKRELKHAELVICNFHHVLN
SDIFMTVLNWLEKEPQDVIVIFDEAHNIESAARSHSSITITEHTLEKAIAEIEANLDIMP
DGGIHNLLKILTSVMQDIYNNRFKFGERERVGRHWYDMRISDPYERNDMVRGKFLKQALD
AGFGDEAAIQATLSEASAFGAMLDENYREQYKKGLTGVLKRSHIRYAADFLSSYLVLSNN
LNYYPVLNVRRDLNDEIYGRIELFTCIPKNVTEPLFDSVFSAVLMSATLRPFDMVKSTLG
IARPTCELSYGTSFPEDRRLTLSVSVPPLFAKTRDDPQTLQAVEEVIFDSIEQTEGNVII
FFQSSFEARRYYGKLESRLSVPVFLDEVGVSSQEIREDFFRMGESGGKAVLVSYLWGTLS
EGIDYRDGRGRTVIIVGVGYPALNDRMNAVESAYDHTFGFGAGWEFAVQVPTIRKIRQAM
GRVVRSPVDYGVRILLDGRFTTEAPKKFGKFSVFEMFPDDERDEFIDVDPEKVKYSLMNF
FQDNAE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaaaaccggatacatgaaatatttcccaaaggaaacctgctacccgaatcag
caggatgcaatggataagatccatgcttctctcattaataaggagatcatactttttgaa
ggagcatgtggtacaggcaagactctcagtgcactggcaccttcacttaatgtgggaaaa
caacttcagaaaaccgtgattattgcaacgaacgttcatcagcagatggtccagttcatc
aatgaggcccgggaaataaaacagacaaacgacctgaaggttgcagtggtaaaaggtaaa
gccacaatgtgcccaaatgagactgattatgaggaatgcaggctcaagcgtgagaacaca
tttgaacttctggaaaccgaaagggaacttgctcttaaaaagcaggaaatgaagtctgca
tatgagaactataaaaagtcaaaggaccctgctcttgtagcattgcgtgatgcgctttcc
aaggagcttgatgttgcagaggaaaaatcaaaggagcttcgcaagcgttcatgtaactac
ctatatgaagtgctgcgctatgatggggaagctttcaggcagtggcttttcgatgatgta
cgcacacctgaagaggtcaatgattatgctttccagaaaggcatgtgtggttacgagcta
ctgaaacgtgaactgaaacatgcagagcttgtgatatgtaatttccatcatgtgctaaat
tcagatattttcatgaccgtgctcaactggcttgaaaaggagccacaggatgttattgtt
atctttgacgaggcacacaatatcgaatctgcagcaaggtcacattcatctattacaata
accgagcacacgctggaaaaagcaattgcagagatcgaggcaaatcttgatattatgccg
gatggcggaatccataatctgctaaagatcctgacaagtgtaatgcaggatatctataac
aaccgtttcaaattcggagaacgtgagcgtgtagggagacactggtatgatatgcgcatc
agtgatccttatgaacgtaatgatatggttaggggtaaattcctgaaacaagcgctggat
gcaggttttggcgatgaagccgcaatccaggcaaccctttctgaagcaagcgcttttgga
gctatgcttgatgagaactaccgtgagcagtataagaaaggacttacaggtgtcctgaaa
cgatcccacataaggtatgcggcagacttcctttcatcttaccttgttctatcaaataac
ctgaactattatccggtattgaatgtgaggcgtgacctcaatgatgagatatacggccgt
atcgaacttttcacatgtatcccgaagaatgtaactgagcctttgtttgattcggtcttt
tcagcggtgttgatgtcagcaactctgcgaccatttgatatggttaagtctacacttgga
atagcaagaccaacatgtgaactatcttacggaacttcgttccctgaggatagaaggctg
actctttcagtttcagttccacctttgtttgcaaagacaagagatgacccgcagacccta
caggcagttgaggaagtaatcttcgattccattgaacagacagaaggtaatgtgatcatc
tttttccagagttcgtttgaagcaaggcgttactacggtaaactggaatcccgtctgagt
gtcccggttttccttgatgaggtgggtgtgtcatcccaggagatcagggaagatttcttc
aggatgggggaatcgggtggaaaagcagttctggtctcgtatctctggggaactctcagt
gaaggaattgattaccgtgatggcaggggaagaactgtaattatagtaggtgtcggttat
cctgccctgaatgacaggatgaatgctgtggaatctgcttatgaccatacttttgggttt
ggtgctggctgggaatttgcagtgcaggtgccgactatccgtaagatccgtcaggcaatg
gggcgagttgtgcgttctccggttgattatggagtaaggattcttcttgatggcaggttc
actactgaagcaccgaagaagttcggtaaattctccgtgtttgagatgttccctgatgat
gagagggatgaattcattgatgttgatcctgaaaaagtcaaatattcccttatgaacttc
ttccaggataatgcagaataa
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