Methanolobus sediminis: RE474_09770
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Entry
RE474_09770 CDS
T09570
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mseb
Methanolobus sediminis
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mseb03400
]
RE474_09770
Enzymes [BR:
mseb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RE474_09770
DNA repair and recombination proteins [BR:
mseb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RE474_09770
Prokaryotic type
RE474_09770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WMW24377
UniProt:
A0AA51UJF8
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All DBs
Position
1968895..1970271
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AA seq
458 aa
AA seq
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MAKKYGLSLFIFRRDLRVDDNTTLNIAMEKSEWVIPCFIFDPRLADKNRKNFNYNSFQFL
LESLGDLDKQLESRNGKLFLFSGLPEDVIGDFNDKHRIEAVFFNKDYTPFSKKRDDVILK
TCKDSGIDVVSCHDALLHEPGTVLTNEGKTYSVFSQFFKKATQRKIPLPSMQEGGFYSVN
PDIPQVFLSDFSIDRNPSLFTKGGRNHALSILQEIADFRNYDNERDYPSISGTTGLSAHN
KLGTISIREFYHYVENELGPDHTLINELYWRDFFTHIAVAHPYVFTRAFKKKFDSLSWSN
DEKLFDEWCKGQTGFPIVDAGMRELNTTGYMHNRVRMIVASFLVKDLHIDWRWGERYFAS
KLVDYDPCVNNGNWQWAASTGADSQPYFRIFNPWLQQKKFDPECLYIKKWIPELEGLSPK
AIHSMDKGQQLPGVDYPQPIVEHSKERNVALVDFKSIE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaaaatacggattatctttgttcatattcagacgtgacctcagggtggatgat
aatactactttgaacattgcgatggaaaagtctgagtgggtaattccttgttttattttt
gatccaagacttgctgataagaacagaaaaaatttcaattacaattcattccagttcctg
ttggaatctcttggagacctggataagcaacttgaatccagaaatggcaaacttttctta
ttctccggtctgcctgaggatgtcattggggattttaacgataaacatagaattgaagct
gtatttttcaacaaggattacactcctttcagcaagaaacgtgatgatgtgattctgaaa
acctgtaaggattcaggtatcgatgttgtaagctgccatgatgctttattacatgagcct
ggtactgtgcttacaaacgaaggaaaaacctattctgtgttctcccagttcttcaaaaaa
gctacgcaaaggaagattccgttgccgtcgatgcaggaaggaggcttctattctgttaat
ccggatatacctcaggtttttctttctgatttttcaattgacaggaatccttctcttttc
acaaaaggaggcagaaatcatgctctttcgatccttcaggaaatcgctgatttcaggaat
tatgacaacgaacgtgattatccgtcaatatcaggtactacaggactttcagctcacaat
aaacttgggactatatcaatacgcgaattctatcattatgtggaaaacgaattaggtccg
gatcacacccttataaatgaactttactggcgtgatttcttcactcatattgctgttgcc
catccatatgttttcacccgtgcttttaagaagaaattcgactcactttcatggtcgaat
gatgaaaagttatttgatgaatggtgtaaaggacaaaccggttttccaattgtagatgca
ggaatgagggaacttaacactacaggatacatgcataaccgtgtgagaatgattgttgca
tctttccttgtaaaggatctgcacattgactggaggtggggtgaacgatattttgccagc
aagcttgtggattatgatccttgtgtgaacaatggaaactggcagtgggctgcatcaaca
ggtgcggattcacagccatatttcaggatattcaatccctggctgcagcagaagaagttc
gatcctgagtgtctgtatatcaaaaagtggattcctgaactggaaggtctttctccaaaa
gccattcattccatggataagggacagcaacttcccggagttgattatccacaaccaatt
gtggagcactctaaggagaggaatgtggcacttgtggattttaaatcaatagaataa
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