Methanolobus sediminis: RE474_10625
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Entry
RE474_10625 CDS
T09570
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mseb
Methanolobus sediminis
Pathway
mseb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RE474_10625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mseb03400
]
RE474_10625
Enzymes [BR:
mseb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RE474_10625
DNA repair and recombination proteins [BR:
mseb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RE474_10625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WMW24533
UniProt:
A0AA51UJ43
LinkDB
All DBs
Position
2136694..2137263
Genome browser
AA seq
189 aa
AA seq
DB search
MAVRSVSELVEQGFEAVEKEILECTDCQLHETVTNKVISKGSRTPRVVFVGEAPGKNEDE
TGVPFCGRAGKNLDGMIEYMGLSGDDYAVINTIKCRPPKNRNPLKSEIKACKPFLEAQIQ
LLNPKVIILLGNTAEKAFCDGEKLEWGVPKEVSGQYTLLKIYHPAALIYQRSRIEEQNAL
IDNNRHLWG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcaggtcggtaagtgaacttgtggagcagggatttgaagctgttgaaaaagaa
atacttgaatgtacagactgccagcttcatgagactgtaaccaataaagtaatcagtaaa
ggctccagaactccgagagttgtttttgttggcgaagctccaggaaagaacgaagatgaa
accggcgttccattctgcggaagagcaggcaagaacctcgatggcatgatcgagtacatg
ggactttcaggcgatgactatgctgttataaacactatcaaatgccgtcctccaaaaaac
cgtaatccgctcaaaagcgagatcaaagcctgcaagccatttttagaagcacaaattcaa
ttgctaaatccaaaagtgatcatacttcttggaaacaccgctgagaaagcattttgtgat
ggtgaaaaactagagtggggagttccaaaagaagttagtggacaatatactcttctgaaa
atataccatcctgcagcacttatttaccagcgctcaagaattgaggaacagaacgcgctt
attgataataacaggcatctctggggataa
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