Methanolobus sediminis: RE474_10820
Help
Entry
RE474_10820 CDS
T09570
Symbol
rrp41
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
mseb
Methanolobus sediminis
Pathway
mseb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RE474_10820 (rrp41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mseb03019
]
RE474_10820 (rrp41)
Messenger RNA biogenesis [BR:
mseb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
RE474_10820 (rrp41)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
RE474_10820 (rrp41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
WMW24568
UniProt:
A0AA51YLI9
LinkDB
All DBs
Position
2175562..2176620
Genome browser
AA seq
352 aa
AA seq
DB search
MSDKPEKFIDENGLRLDGRRVDEIRPMKMEIGVLSRADGSCYLEWGKNKVLAAVYGPREL
HPRRLQKADSALIRYRYNMAAFSVEDRIRPGPSRRSIEISKVSREAFEPVVLTHLYPGAV
IDVFAEVLQADAGTRTAAINAACMALADAGIPMKGLVSACAVGKVDGQLVLDLNKPEDNY
GDADIPMAMTSDGEITLVQMDGDVTPEEFKQAIEMCKEGCRQIMEIQKETLRNKFTKLDD
VEISDDDEDVDVSALVESTLEPSEDDVEDEDEIEVESDDDADQEEEIEDADEDSVDEEED
VPESEDDEDEDLDSVESHSDFEAVELVEDFEESFTDVDEEDATEDEDDEEKA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaacctgaaaagttcattgatgaaaatggattacgtctggacggcagacgt
gttgatgagatcaggccaatgaaaatggagataggtgtactctccagggctgatggttca
tgttatttagaatggggtaagaacaaggtacttgcggctgtttatggtccaagggaactt
cacccaagaagattgcagaaagctgattctgcactgataagataccgttataatatggca
gctttttctgtagaggaccgtataagaccaggtccaagcagaagaagtattgagatatca
aaggtaagtcgtgaggcatttgagcctgtagtgcttactcacctttatcctggtgcagtg
atcgatgtttttgctgaggtcctccaggctgatgcaggtacaaggactgcagctatcaac
gcagcctgtatggctcttgctgatgcaggtattcctatgaaagggcttgtctctgcatgt
gcagtaggaaaggttgacggacagcttgtacttgatcttaacaagcccgaagacaactat
ggtgatgctgacatcccaatggctatgacatctgatggcgagattactcttgttcagatg
gacggtgacgttactcctgaagagttcaaacaggcaattgagatgtgcaaggaaggatgt
cgccagattatggagatacagaaggagactcttagaaacaagttcacaaaacttgatgat
gtagagatctctgatgatgatgaagacgttgatgtttctgcccttgtggaatccactctt
gaaccatccgaggatgatgttgaagatgaggacgaaattgaagttgaatccgacgatgat
gctgatcaggaagaagagattgaagatgctgacgaggattcagttgatgaagaagaagat
gtacctgaatctgaggacgatgaagatgaagacctcgattcagtagaatctcattctgat
ttcgaagctgtcgagctggtagaggattttgaagagtctttcactgatgtggatgaagag
gatgccacagaggatgaagatgatgaagagaaggcctga
DBGET
integrated database retrieval system
