KEGG   Methanolobus sediminis: RE474_11335
Entry
RE474_11335       CDS       T09570                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
mseb  Methanolobus sediminis
Pathway
mseb03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mseb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RE474_11335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mseb03032]
    RE474_11335
DNA replication proteins [BR:mseb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     RE474_11335
SSDB
Motif
Pfam: AAA RCF1-5-like_lid Rad17 AAA_22 AAA_30 AAA_16 NACHT RuvB_N AAA_14 nSTAND3 DEAD AAA_assoc_2 DUF815 AAA_33 RNA_helicase AAA_7 TsaE DUF3334 Viral_helicase1 DUF4092 AAA_5 DNAX_ATPase_lid IstB_IS21 AAA_6
Other DBs
NCBI-ProteinID: WMW24665
UniProt: A0AA51UME4
LinkDB
Position
2276337..2277845
AA seq 502 aa
MTVQMEWAEKYRPVSLGDVVGHKKVIDDLRNWGDQWEYGIPEKRAVILHGQAGIGKTSSA
HALARDMNWEVIELNASDQRTAGVIEKVAGSASTMKTLTGTSDKRLIILDEADNLHGNSD
RGGARAIVDVIKKASQPIVLIANDIYGLSSTVRSLCIELKFGSVQSRSMVPALKKIAVQE
GVMCGVGVIEKIAESADGDFRSAVNDLQAIAMGRTEINIEDISTSERDNKESIFKVVGRI
FKGKDVSSALEATYNLDETPEDLIHWVDENLPYQYTGKGEEALTSDIVHAYSYLSRSDRF
LGRVRRRQNYRMWRYAGMLMTGGTVVSKSRMRGGFVKYQPPSLWRKMGQMRSRRDMRNNI
AVKIGSHCNESMRYSRLEVAGMYSRLIQEDEYAADIVAILGLDMDEVLHMAGAKKVTKKL
QAVYDDAQKRRQAFVSAEEPVFFVEKAAPKKDPSQLSFDKLPASNSTSLDSAFGKDSAKN
NDGAAPAKKEVAAKPQKTLFDF
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgactgtgcagatggaatgggcagagaagtacaggccagtctcactgggcgatgtagtt
ggccacaagaaagtgatagatgatctcaggaactggggtgatcaatgggaatatggcatt
cctgaaaaaagggcagtaatactgcacggtcaggcaggtataggtaaaacatcatctgca
catgcgcttgccagagatatgaactgggaggtcattgagctgaatgccagtgaccagagg
actgcaggagttattgaaaaagttgcaggctccgcgtccacaatgaaaacccttactggc
acgtctgataagaggctcataatccttgatgaagctgataatctccatggtaatagtgac
cgtggcggtgcacgtgccatagtcgatgttatcaagaaagcaagtcagcctattgttttg
atagctaatgatatttacggactttcatctactgtacgttctttatgtattgagctcaaa
tttggttcggtgcagtcccgctctatggtcccggcactaaaaaagatcgcagtacaggaa
ggtgttatgtgcggcgtgggtgttatagagaagattgcagaatctgctgatggtgatttc
agaagtgctgtaaatgatctccaggctattgcaatgggtcgtactgagatcaatattgag
gatatctccacctctgaacgcgataataaagaatctatattcaaagtggttgggaggata
ttcaaaggcaaggatgtttcatctgccctggaagcgacctacaatcttgatgaaactccc
gaggatctcattcactgggtcgatgaaaatcttccataccagtatactggcaaaggtgag
gaagccttgacttctgatatagtccatgcttattcttatctttcccgctcagaccgcttc
ctcggacgtgtgcgcaggcgccagaactatcgcatgtggcgttatgcaggcatgcttatg
actggcggaactgtagtttccaaatctcgtatgcgtgggggctttgtaaaataccagcca
ccttctctctggcgtaagatggggcagatgcgttcccggcgagatatgaggaacaacatt
gctgtaaagataggctcacattgtaatgaatcaatgcgttattcccgtcttgaggtagca
ggtatgtattcacgccttattcaggaagatgaatatgctgctgatatagtagctattctt
ggtcttgatatggatgaggtgcttcacatggcaggggcaaagaaagtgaccaaaaaactt
caggcggtctatgatgatgcgcagaaacggcgccaggcatttgtttccgcggaagaacct
gtattttttgttgaaaaggctgcaccaaagaaagatccttctcaacttagttttgataaa
ctgccagcttcaaacagtacttcattagattccgcttttggaaaggattctgctaagaat
aatgacggggcagcacctgctaaaaaggaagttgcagcaaaaccacaaaaaacattattt
gatttctga

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