Methanolobus sediminis: RE474_11345
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Entry
RE474_11345 CDS
T09570
Name
(GenBank) DNA topoisomerase VI subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
mseb
Methanolobus sediminis
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mseb03032
]
RE474_11345
Enzymes [BR:
mseb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RE474_11345
DNA replication proteins [BR:
mseb03032
]
Prokaryotic type
DNA Topoisomerases
RE474_11345
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Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
Top6b_C
HATPase_c
HATPase_c_3
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WMW24667
UniProt:
A0AA51UJG3
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Position
2279076..2280938
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AA seq
620 aa
AA seq
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MDNPIAEELAKNQKSISVAEFFEKNRQILGFDSAPRSLITTVKEAVDNSLDACEESEILP
DIFLHIERSGKDNVVIIVEDNGPGIIKEQIPKVFAKLLYGSRFHALKQSRGQQGIGISAS
VLYSQLTSGHHTKIISKIGHGKPAHYYELMINTSTNEPEIIKDDVVDWDRPHGTRIEMEM
EASYVKGRRQSIYEYLKATAIVNPHARITLIEPDGNQETFERATDKLPVPAKEILPHPHG
IELGTLMKMLRYTERQKLSPFLRYSFSKIGHLAAEEICKASGLDPDLDPHEMTREQSRKL
LDAFSKVKIMAPPTDCLSPIGEDLIYKGLEKEFSVDFIATTTRAASVFSGNPFIVEVGIA
FGGELQKDDRVDIMRFANRVPLLYQQGGCVITHAIESVKWKQYGLNQPGGGLPTGPVVIL
VHVASTNVPFTSESKDAVAEIPEIKDEIELAIKEVSRKLNRYLNKRDNLKKRREKEIIIT
KVLPKMASKLAETLERDVPDINPVVAKVMGNLLVDRIVESDGNGGAKISIRAKNYTSKKQ
DFNVHDMVPFEIENAVPEPKVISMGSDFDYIWKLSIPPSSSKVLNYSVATLSEAEIAKLP
TLIVEGLDEELVTGAKAIRG
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggataatccaattgcagaagaacttgccaaaaaccagaaatcaataagcgttgcagag
ttctttgaaaagaaccggcaaatactgggatttgactcagccccacgcagtcttataaca
acggtcaaggaagcagtggataactctcttgatgcatgtgaggaatcagagattctccct
gatatttttcttcacatagaacgctcgggcaaagacaacgtagtaatcatcgtagaagac
aacgggcctggtatcattaaggaacaaattccgaaggtctttgcaaaactcctctatggt
tcaaggttccatgctctcaagcagagccgtggtcagcaaggtataggtatatcagcatct
gtactttattcacaactgacatccggtcatcacacaaagatcatatccaagataggtcat
gggaaacctgctcactattacgaactgatgataaataccagcaccaacgagcctgagatt
attaaggatgatgtggtggactgggacaggccgcatggtactcgcattgaaatggaaatg
gaagcttcttatgtaaaaggaaggcgccagtctatctatgagtatctgaaagccacagct
atcgtgaatcctcatgcaagaatcacccttatcgaacctgatgggaaccaggagacattt
gaaagagcaacagacaaacttcctgtccctgcaaaagagattttaccgcatcctcatgga
attgagcttggtactctcatgaaaatgctgaggtacactgaaagacagaaactttcacca
ttcctgcgttactctttctcaaagatcggtcaccttgccgctgaagaaatatgcaaggcc
tcaggtcttgatcctgatctggatcctcatgaaatgacaagggaacagtcccgtaagctt
ctggatgcgttctcaaaggtaaagataatggctcctcctacggattgtctttcacctatc
ggtgaagatcttatctataagggacttgagaaggagttcagtgttgatttcatcgccaca
acaactagagctgcatctgtattttcaggtaatcctttcattgttgaagttggaattgcc
tttggtggtgaactccagaaagatgatcgtgtagacatcatgcgttttgccaacagggtc
cctcttctgtatcagcagggaggatgtgttatcactcatgcaatagagtctgttaagtgg
aaacagtatggattgaatcagccaggtggcggacttccaacaggtcctgtggttatcctg
gttcatgtagcatcaactaatgttccgttcacatcagaatcaaaggacgcggttgcagaa
atacctgaaattaaagatgagatagaacttgccatcaaagaagtttccaggaagttaaac
aggtatctcaataagcgtgataatctcaaaaagagacgtgagaaggagatcatcatcaca
aaagtgctgccaaagatggccagtaaacttgccgaaactcttgaaagggatgttcctgac
ataaatcctgtagttgcaaaggttatgggtaatcttctggtagaccgaattgtagaatct
gatggcaatgggggtgcaaagatctccatcagggctaagaattacaccagcaaaaaacag
gatttcaatgtacatgacatggtaccatttgaaattgaaaatgcagtaccggaacccaag
gtgataagcatgggtagtgattttgattacatatggaaattaagtattcctccgagctcc
tccaaggttctcaattactctgtagcaacactcagtgaagcggaaattgcaaaattaccc
actttgatagtggagggtcttgatgaagaacttgttaccggtgcaaaagctatcaggggg
taa
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