Marinobacterium sediminicola: LN244_01425
Help
Entry
LN244_01425 CDS
T07998
Name
(GenBank) mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msec02000
]
LN244_01425
Transporters [BR:
msec02000
]
Other transporters
Pores ion channels [TC:
1
]
LN244_01425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MscS_porin
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ULG69504
LinkDB
All DBs
Position
complement(304416..307637)
Genome browser
AA seq
1073 aa
AA seq
DB search
MTIRLLRLWLLLAGLLLTCTLTLAASPEETIQRLEQQLEQQQDSTGDQAALSDLYQRTLS
ALKSSQQYQRRAEELQQQLEQQPELLRRQQQTLEQAADPIKDSGFLQLDRPELEQAITLK
RATLLQLEQQQEQQSQQIDLNEQKLLSLREQLAELKQTPPDLSALPAEQAGREFNDARLQ
LKNALQERRSSHIRALELELLALPGQTELARLQLEQLRRQVQQASLDLKGMLDRREQMQR
DELESTLSSLTVPDETAMEHPMLTDLLQQNRELSEQLRQLIEHTSDAQHQRGVLERELDL
ITRSFKTIQQQLELESYSASYELRRFMQELSRPVDTADTRQALNALRLSSLDLNSLRQTD
SGSGMEIADLTATQRRYQEQLQQNQQTLRDRLQENRQQLISELSQLLAVKEQLNERLQQA
RRLIEQQLLWLPVAPPVSWQWPGEVASGLSMLQQQLIQLFAQPLLARDAHLNSLLGFFAL
LLILSLATYRYQKQHRQRWRQELGNVVHDRFSRTLRLLLSGAIAALPAPALLLLLRSYSL
NPDHPYHQVIDQLLLLWALSLQFYGMALIWLRAPDGLMNGHFSVPAPLTRVIRRQFHLLF
WVSLPLLSLLLVTDSYNAIELQSGPGRLLFLLLVASLLLFWRGFWHVGHALAHLRPNHRW
WHNTHLWVSLLILFNLAMFGLGLWGYTLTALFFMLILLVVILQFIGAFILFKLGLRWLLI
EERRLAFSRARARRAEIIAARESKEETAPLKEDYLDLQTISDQSRVLLKTSIVLLLGVFL
WLTLGDFLPTLQVLESVQLWSSLEQNGDQKVLTHVTLRDLVVGALIVWLSLLAAKNLPGL
LELLALRHLDLSPGTGYAVTTLLKYSLILVGVMIAIGQFGVQWSKLQWLVAALGVGLGFG
LQEIVANFVSGLIILFEKPVRIGDTVTLGNVTGTVSRIQIRATTITDWDRKEVIIPNKTF
ITEQLINWSLSDATTRVVITVGIAYGSDVELAEQLLLKAAQENERVLEDPAPDAYFREFA
DSTLSIDLRVFVSSMADRVPVTDELNKAINRMFNEHNIEIAFPQLDVHLHRSR
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgacaatacgattactgcgactctggttattactggccggtttgctcctgacctgtacc
ttaactttagctgcttccccggaagaaaccatccagcgcctggagcagcagctggaacaa
cagcaggattcgacaggcgatcaggctgctctgagcgacctctatcagagaaccctgagt
gccctgaaaagcagccagcaataccagcgacgcgccgaagagctgcagcaacagctggaa
caacagccagagctgttgcgccgtcagcagcagacactggagcaggccgctgacccgatt
aaagacagcggttttctacagctggaccgacccgaactggaacaggcgattacgctgaag
cgtgcgaccctgctgcagcttgagcagcagcaggaacaacagagtcagcagatcgacctc
aatgaacaaaagctgctgagcctgcgcgagcaactggctgagctcaagcagaccccgccg
gacctgtccgctctgcccgccgagcaggcaggccgggagttcaacgatgctcgtctgcaa
ttgaaaaacgccctgcaggaacgtcgcagcagtcacatacgggcactggaactggagctg
ttggctttgcctggacagacagagctggcacgcctgcaactggaacagctgcgacgtcag
gttcagcaggccagtctcgacctgaaagggatgctggatcgccgtgaacagatgcagcgg
gacgagctggagagcacgctgagcagtctgacggtgcctgacgaaacggccatggaacat
ccgatgctgaccgatctgctgcaacagaaccgggagttgagcgaacaactgcggcaactg
atcgagcacaccagtgacgcccagcaccagcgcggggtactcgaacgtgagctggacctg
atcacgcgcagcttcaaaaccatacagcagcaactggagctggaaagctacagtgccagt
tatgaactgcgccgcttcatgcaggagctgtcccgcccggtggatactgcagacacgcga
caggcgttgaacgctctgcgcctgagcagtctggacctcaacagcctgcgtcaaactgac
agcggcagcggtatggaaatcgccgatctgactgctacgcagcgccgatatcaggagcag
ctgcagcaaaaccagcagaccctgcgcgaccgccttcaggaaaaccgccaacaactgatc
agtgagctgtcacaactcttggcggtcaaggaacagctcaacgaacgcctgcagcaagcc
cgacgcctgattgagcagcagctgttatggttgccggttgcgcctccggtttcatggcag
tggcctggcgaggtcgctagcggtctgagtatgctgcaacaacagctgatacagcttttt
gcccagccactgctggccagggatgcccacctgaactcactgcttgggttcttcgccctg
ctgctgatcctgtcactggcaacctaccgctaccagaaacagcaccgccagcgctggcgt
caggaactgggcaacgtggtccacgaccgtttttcccgcacgctgcgactgctgttgtcc
ggtgccatcgccgcgttgccggcaccggcgctgttgctgctgctgcgcagttacagcctg
aacccggaccacccctatcatcaggtcattgatcagctgctcctgctatgggcattgagt
cttcagttctatggcatggccctgatctggctcagagctccagacggcctgatgaacggc
cacttttcggtgcccgcccccctgacccgtgtgatcaggcgacagtttcacctgttgttc
tgggtttctttgccactgctgtccttgctgctggtcaccgacagctataacgccatcgag
ttgcaaagcggtcctggtcgtctgctgttcctgcttctggtagcaagcctgctgctgttc
tggcgaggcttctggcatgtcggccacgccctcgcacatctgcggccaaatcaccgctgg
tggcacaacactcacctgtgggtcagcctgctgatcctgttcaatctggccatgttcgga
ctgggactctggggctacaccctcacagccctgttcttcatgttgatattgctggtcgtg
atactgcagttcatcggcgcgtttatcctgttcaagctgggcctgcgctggctgctgatc
gaagagcgccgcctggcgttcagtcgcgcccgtgcccgccgggcagagattattgcggct
cgcgaaagcaaggaagaaacggcgccgctcaaggaggactatctggatctgcagaccatt
tcagaccagtctcgggtgctgctcaagacctccatcgtgctgctgctgggcgtattcctg
tggctgacgctgggcgactttctgccaacccttcaggtgttggagagtgttcagctgtgg
agcagtctggaacaaaacggagaccaaaaggtgctcacccacgtaaccctgcgtgacctg
gtcgtcggggcgttgattgtctggctcagcctgctggccgccaagaacctcccgggcctc
ctagagctgctggccttgcgtcatctggacctgtcaccgggcacgggctatgccgtcacc
accctgctcaagtactcattgattctggtcggagtcatgatcgccatcggccagtttggg
gttcaatggagcaaactgcagtggctggtggccgcactgggtgtggggctgggcttcggt
ctgcaggaaatcgtggccaacttcgtttcaggcctgatcatcctgttcgagaaaccggtc
cgcatcggcgataccgtcaccctgggcaatgtcaccggcaccgtttcacgcatccagatt
cgcgccaccacgataaccgactgggatcgcaaggaagtgattatccccaacaagaccttc
atcaccgagcaactgatcaactggtcactcagtgatgccaccacgcgtgtcgtgatcacc
gtcggtatcgcctatggcagtgatgtcgaactggccgaacagctgttgctgaaagccgca
caggagaatgaacgtgtgcttgaagacccggcaccggacgcctatttccgcgagtttgcc
gacagcaccctgagtattgatctgcgcgtattcgtcagcagcatggcagaccgggtaccc
gtcaccgacgagctgaacaaggcgatcaaccggatgttcaatgagcacaacatcgaaatt
gccttcccgcaactggatgtccacttgcatcgctcaaggtag
DBGET
integrated database retrieval system
