Marinobacterium sediminicola: LN244_01965
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Entry
LN244_01965 CDS
T07998
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
msec
Marinobacterium sediminicola
Pathway
msec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LN244_01965 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msec03400
]
LN244_01965 (nfo)
Enzymes [BR:
msec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LN244_01965 (nfo)
DNA repair and recombination proteins [BR:
msec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LN244_01965 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PhageMin_Tail
Motif
Other DBs
NCBI-ProteinID:
ULG69605
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All DBs
Position
417519..418364
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AA seq
281 aa
AA seq
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MYYIGAHVSASGGVENAPLNAARIGANAFALFTKNQRRWDAKPLTSKSIKAFKANCERLG
FSADQILPHDSYLINLGHPETDALEKSRVAFLDEMQRCEQLGLKLLNFHPGSHLRKVDEA
TCLSTIAESINLALAETENVVAVIENTAGQGSNLGFRFEQLAAIIEQVDDKSRVGVCLDT
CHTFAAGYDLRTPEACEHTFAEFERIVGFEYLRGMHLNDSKGALESRIDRHHSLGQGEIG
WAPFEYIMKDPRFEGIPLVLETIEPEIWADEIQQLRALAAA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtactatatcggagctcatgtcagcgcttcgggcggggttgaaaatgccccgctgaac
gccgccagaatcggtgccaacgcctttgccctgtttaccaagaatcagcgtcgctgggat
gccaaaccgctgaccagcaaaagcatcaaggcattcaaggccaactgcgagcggctgggt
ttttcagcggatcagatcctgccgcatgacagctacctgatcaacctgggtcacccggaa
acagacgctctggaaaaatcccgcgtggcttttctggacgagatgcaacgctgtgaacag
ctcgggctcaagttgctcaacttccaccccggtagccatctgcgcaaggtggatgaagca
acctgcctgagcaccatcgctgagtcgatcaacctggcgctggccgagactgaaaacgtt
gtcgccgtgatcgaaaataccgctggtcaaggctccaatctgggctttcgctttgagcag
ctggccgcgatcatcgagcaggtcgatgacaagtcccgtgtgggggtctgtctcgatacc
tgtcacacctttgccgcgggctatgacctgcgtacacccgaagcctgtgagcataccttc
gccgagtttgagcgtatcgtcgggttcgagtacctgcgggggatgcacctgaacgactcc
aagggagcgctggaaagccgtattgaccgccaccacagcctggggcagggtgaaatcggc
tgggcgcctttcgaatacatcatgaaagatccccgctttgaaggtattccgctggtactg
gagaccatcgagccggagatctgggctgatgagatccagcagctgcgggcgctggcggct
gcctga
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