Marinobacterium sediminicola: LN244_02455
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Entry
LN244_02455 CDS
T07998
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msec03016
]
LN244_02455
Enzymes [BR:
msec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LN244_02455
Transfer RNA biogenesis [BR:
msec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LN244_02455
Prokaryotic type
LN244_02455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ULG69703
LinkDB
All DBs
Position
523335..524372
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AA seq
345 aa
AA seq
DB search
MNLDLACKWLYGEPLSQAMLRSAADDFQVYERLPFEPDGEGEHLFLYIRKTGENTDWVAR
QLARFCQISPRDVGYAGKKDRHAVTEQWFSVRLPIGRTLNWSLFGGETIEVLKTERHSRK
LRLGALSGNRFVIRLRQVSQPDALAARIEKVRLGVPNYFGEQRFGNDGGNLTKGQALLAG
TLRERQRHKKGLYISALRSWLFNQVISARIDQQLWSSILPGDVLMLNGTQSCFMADNPSD
MMPRLEQGDLHLTGPMWGRGELMTQIDARAFEMAALAPWQSLCEGLEGLGLNQERRSLRL
MPQGLKAEAEAEDQWRLEFELPAGAFATSVLRELCQWHNAATEQI
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
ttgaacctagatctcgcctgtaagtggctgtatggcgagccattatcccaagcgatgctg
cgcagtgccgcggacgactttcaggtctatgaacgtctgccgtttgaacctgatggcgaa
ggggagcatcttttcctgtatatccgcaagaccggagaaaacactgattgggtcgcccgc
caattggcacgcttctgtcagattagccctcgtgatgtcggctatgccggcaaaaaggat
cgccacgccgtaaccgaacaatggttcagcgtgcgtctgccgatcggaagaactttgaac
tggtctctgttcgggggtgagactatcgaggtactgaaaacggagcgccacagccgtaaa
ctcaggctgggggctttgtctggtaaccgatttgtcattcggctgcgccaggtatcccag
cctgacgcattggctgcgcggattgagaaagtgcgcctgggggttcccaactatttcggc
gagcagcgcttcggcaatgatggcggaaacctgaccaaggggcaggcacttttggccggg
acgctgagggagcgccagcgacacaagaaagggttgtatatctctgccctgcgctcctgg
ctgttcaatcaggtgattagcgcccgtattgatcagcagttatggagcagcatactgccc
ggggatgtactcatgctgaatggcacccagagctgtttcatggctgataatccctcggac
atgatgccgcgccttgagcagggtgatctgcatttgaccggccccatgtgggggcgtggc
gagttgatgacccagatcgatgcgcgggcatttgaaatggcagcgctggcgccatggcag
tcattgtgtgaggggcttgaaggcctgggcctgaaccaggagcgccgctcacttcgattg
atgcctcaggggttgaaggccgaagctgaggcagaggaccagtggcgtctggaattcgaa
ctcccggcaggggcttttgccaccagtgtattgcgtgaactttgtcagtggcataacgcg
gccaccgagcagatataa
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