Marinobacterium sediminicola: LN244_04240
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Entry
LN244_04240 CDS
T07998
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msec03032
]
LN244_04240 (gyrA)
03400 DNA repair and recombination proteins [BR:
msec03400
]
LN244_04240 (gyrA)
Enzymes [BR:
msec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LN244_04240 (gyrA)
DNA replication proteins [BR:
msec03032
]
Prokaryotic type
DNA Topoisomerases
LN244_04240 (gyrA)
DNA repair and recombination proteins [BR:
msec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LN244_04240 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ULG70028
LinkDB
All DBs
Position
905305..907941
Genome browser
AA seq
878 aa
AA seq
DB search
MGDLAKEVLPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMAKISHELLADLDKETVDFVDNYDGTEKIPAVLPTRVPNLLVNGSAGIAVGMAT
NIPPHNLGEVVKGCLALIDNPEISIDELMESIPGPDFPTGGIINGRAGILQAYRTGRGRI
YVRARHHVEDHPKNGRPMLVITEIPYQLNKARLIEKIAELVKEKKIEGISELRDESDKDG
MRIVIELRRGEVPEVVINNLFAQTQLQSVFGINMVALVDGQPKILDLKTILECFVRHRRE
VVTRRTIFELRKARERGHVLEGLAIALANIDPVIELIKSSPTPAEAKERLIATAWAPGNV
TDMLERAGETACRPEDLEPQFGLRDGHYYLSPLQAQAILDLRLHRLTGLEHEKLIAEYRE
LLEKIAELLHILGSYERLMEVIREELEALVAEYADDRRTEIQASMQDLTVADLITEEDMV
VTISHAGYAKTQPLTDYQAQRRGGKGKSATAMKDEDFIEHLLIANTHDTVLCFTNMGKVY
WLKVYEIPPASRASRGRPVVNILPLAEDEWISTILPVKEFDPERFIFMATANGTVKKTPL
DAFSRPRSTGLIALDIVEGDRLIGATLTSGQDDVMLVSSAGKAIRFNENDVRAMGRTARG
VRGVKLDDDARVIALIVPQAGGEVLTASENGYGKKTRVDEFPLRGRGGQGVIAMQCTERN
GQLAGAVQVFEGDDVMLISDRGTLVRTRSSEISSLGRNTQGVMLIRLAEEEALVGIARIE
EPEEDENADEGEEVAAESNVTVDADEAAGETVPDTGDE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatttagccaaagaagttctgccagtcaacattgaagacgagctgaaacagtcc
tacctcgattacgccatgagtgtgattgttggccgagctctgccggatgtgcgtgacggc
ttgaaaccggttcatcggcgtgtattgttcgccatgaacgaactgaacaacgactggaat
aagccgtataaaaagtcggcgcgtgtagtcggcgacgtcatcggtaaataccacccgcac
ggtgacagtgcggtctatgacaccatcgtccgcatggcgcaggatttttccatgcgttac
atgctggtcgacggccagggcaacttcggttccgtggatggcgactcggcggcagccatg
cgttataccgaaatccgtatggccaagatctctcacgagttattggctgatctggacaag
gaaacggtggacttcgttgataactacgatggcaccgagaaaattcccgctgttctgccg
acccgcgttccgaacctgctggtcaatggctctgccggtattgcggtgggtatggcgacc
aatataccccctcataacctgggtgaagtggtcaagggctgtctggcgctgattgataac
ccggagatcagcatcgatgagctgatggagtccattccaggtcccgacttccccactggc
ggcattatcaacggtcgtgccggtatcctgcaggcctaccgcaccggtcgtggacgtatc
tatgtacgagcccgccatcacgtcgaagatcatcccaaaaacggtcggccgatgctggtg
atcaccgagatcccgtatcagctcaacaaggctcgtctaatcgagaagattgcagaactg
gtcaaagagaagaagatcgaggggatcagtgagctgcgtgacgagtccgacaaggatggt
atgcgcatcgtgattgagctgcgtcgtggtgaagtccccgaggtggtgatcaataacctc
tttgctcagactcagctgcagagcgtctttggcatcaatatggttgcactggtcgatggc
cagcccaagatcctggatctgaaaaccatactggaatgcttcgtacgccaccgtcgcgaa
gtcgtgacccgtcgtaccatctttgaactgcgcaaggcgcgtgagcgtggtcacgttctg
gaaggcctggcgatagcgctggccaacattgatccggtcatcgagctgatcaagagctcg
cccactccggctgaagccaaggaacgcctcatcgctacggcatgggcaccgggcaacgtc
accgacatgctggaacgtgccggtgaaacggcttgccgtcctgaagaccttgagcctcag
ttcggtttgcgagatggccactactacctgtcgccgcttcaggcgcaggcaatcctggat
ctgcgcctgcaccgtttgaccggcctggaacacgaaaagctgattgcggaatatcgtgag
ctgcttgagaagatcgcggaattgctgcacatcctggggtcctacgagcgcctgatggaa
gtgatccgcgaagagcttgaagctttggttgccgagtatgccgatgatcgtcgcaccgag
attcaggcctccatgcaggatttgaccgtagcagacttgatcaccgaagaagacatggtg
gtgaccatttcccatgccggctatgccaagactcagccgctgaccgattaccaggcgcag
cgtcgtggcggtaagggcaagtcggccacagcgatgaaggacgaggactttatcgagcac
cttctgatcgcgaatacccatgataccgtgctctgcttcaccaatatgggcaaggtgtac
tggctcaaagtgtatgagatcccgccggcaagtcgtgcttcacgtggtcgcccggtggtg
aatatcctgccgttggccgaggatgagtggatcagcaccattctgccagttaaggagttt
gaccctgaacgtttcatcttcatggcgaccgctaacggtaccgtcaagaagacaccactg
gatgcattctcgcgtccacgcagcaccggcttgattgcgttggatatcgttgaaggtgac
cgtttgatcggcgctaccctgaccagtggtcaggacgatgtcatgttggtgagcagtgcc
ggcaaggcaattcgtttcaacgaaaatgatgtacgagccatgggccgaacggctcgcggc
gtgcgtggcgtgaaactggacgacgatgcacgcgttatcgcgctgatcgtgcctcaggca
ggcggtgaagtgctgaccgcatccgagaacggctatggcaagaaaacccgtgtggacgag
ttcccgctgcgtggtcgtggtggacagggtgtaattgccatgcagtgcaccgagcgtaac
ggtcagttggccggagctgttcaggtgtttgagggtgacgacgtgatgctgatcagcgac
cggggtaccctggtacgtactcgcagcagtgaaatctccagcctgggtcgaaacacccag
ggtgtgatgcttattcgtctggctgaagaagaggctctggtcggtattgcccgcatcgaa
gagcccgaggaagacgaaaacgctgacgaaggcgaggaagtggctgctgagtcgaatgtt
accgttgacgctgatgaggctgctggcgaaacggtgcctgataccggtgatgaataa
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