Marinobacterium sediminicola: LN244_05300
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Entry
LN244_05300 CDS
T07998
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
msec01011
]
LN244_05300 (ampD)
Enzymes [BR:
msec01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
LN244_05300 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:
msec01011
]
Peptidoglycan biosynthesis and degradation
Amidase
LN244_05300 (ampD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
NAT
Motif
Other DBs
NCBI-ProteinID:
ULG70230
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All DBs
Position
1135788..1136327
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AA seq
179 aa
AA seq
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MDIIDHRITDATYIPSPNCNERPEGEISLLVIHNISLPPGQFGGGHVTELFTNRLDPDEH
PYFAEIQGMEVSAHLLIERDGTMTQFVPFDRRAWHAGKSIFEGREACNDFSIGIELEGTD
HTPYTDAQYEALAVVTRALMRAYPQLTKDRITSHSNIAPGRKTDPGSVFDWSRYRRSLG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggatatcattgatcatcgtattacggatgccacctacataccctcgccgaactgcaat
gagcgcccggagggggaaatttcactgttggtcatccacaacatcagcctgccaccggga
cagttcggcggcgggcatgtgaccgaactgtttaccaaccggctggatcctgatgagcat
ccctatttcgctgaaattcagggaatggaagtgtcggcgcacctgctcatcgagcgggac
ggaaccatgacccagtttgtgccttttgatcgtcgcgcctggcatgccggaaaatcgatc
tttgaggggcgtgaggcctgcaatgacttttccatcggcattgaactggaaggtaccgat
cataccccctataccgatgcccagtatgaggcgttggctgtggtgacccgggcgttgatg
cgggcctatccgcagctgacgaaagaccgtattaccagtcacagtaatatcgccccgggc
cgcaagaccgatcccggttctgtcttcgactggtcacgctaccggcgatctcttggatga
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