Marinobacterium sediminicola: LN244_05340
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Entry
LN244_05340 CDS
T07998
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msec03000
]
LN244_05340
Transcription factors [BR:
msec03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LN244_05340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ULG70237
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Position
1141952..1142845
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AA seq
297 aa
AA seq
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MLNKLNFRHLYHFWVVAREGSMAKASQILDLAPQTLSSQVATLESEIGGLLFRREGRGLR
LTDLGLTVQRHADEIFDAAEALQQVLNMPADERPLRLAVGISASIHKLIAWRLIEPALQL
DRALNLSCETGRTPNLLEDLKRHDLDIVLTDRPPILEADSRLHMHELVSSPMSLFAAPLL
AQSLKDGFPDSLDGQPFLANAVEAPYVNQLMQWFDDVGVRVSIRAEVDDSALIKVFGHHA
MGFFAAPSVIADEVCRQYQVEWVGEVQTAQDRLYAITRGAQPSHPAVQAICQTRWQD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaaactcaattttcgtcacctgtatcatttctgggtggtggcccgagagggc
agcatggccaaggccagtcagatactcgatctggcaccgcagacactgagcagtcaggtg
gcgacgctggaaagcgagattggcggtctgctgtttcgacgtgaggggcgggggctccgg
ctgaccgatctgggcctgacggtgcaacgtcatgcagatgaaatctttgatgccgccgag
gcgttgcagcaggtactgaacatgccggctgatgaacgccctttgcggctcgctgtcggt
atttcagcatcgattcacaagctcatcgcctggcgtctgatagaacccgcgcttcagttg
gatcgagcgctcaatctcagctgcgagacaggccgtacgcccaaccttctggaagacctc
aagcgccacgatctggatattgtcctgacggatcgccctccaatactggaagcggatagc
cgactccatatgcatgaactggtcagctctccgatgagtctcttcgcagcgccgttgctc
gcacagtccttgaaggacggctttccagacagcctcgatggtcagccattcctggctaat
gccgttgaagcgccttacgtgaaccagttaatgcagtggttcgatgatgtgggcgtcagg
gtttcgatccgtgcagaggtcgatgacagtgcgctgatcaaggtgtttggacaccatgcg
atgggctttttcgcggcgccctcagtgattgcggacgaggtatgtcggcagtatcaggta
gagtgggttggagaggttcagactgctcaggatcggctttatgccattactcggggggct
cagccatcgcacccggcggttcaagccatttgtcagactcggtggcaagattga
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