Marinobacterium sediminicola: LN244_05905
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Entry
LN244_05905 CDS
T07998
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
msec
Marinobacterium sediminicola
Pathway
msec02020
Two-component system
msec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN244_05905
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LN244_05905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
msec02022
]
LN244_05905
Two-component system [BR:
msec02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
LN244_05905
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
AAA
Mg_chelatase
AAA_16
AAA_2
AAA_19
nSTAND3
AAA_30
AAA_14
AAA_3
AAA_29
TIP49
F_actin_bind
Motif
Other DBs
NCBI-ProteinID:
ULG70347
LinkDB
All DBs
Position
complement(1269866..1271266)
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AA seq
466 aa
AA seq
DB search
MTSTPNILLVDDDTALLKLLEMRLQASGYEISCAESGEEALGLIRQYSFDLVLTDLRMDG
MDGLTLFSRIQQEQPDLPVIIMTAHGSIPEAVEATQKGVFGFLSKPIDKQHLLDTVRAAL
KSSQRNLDQSWRASIISHSDRMEQILDQAQRVAASDVSVLITGPSGSGKELVAKAIHKAS
ARGDKPFVAINCGALPEQLLESELFGHTKGAFTGAVNQHEGLFRAAQGGTLFLDEIGDMP
ITLQVKLLRALQERTIRPVGSTQSVPIDVRIISATHRNLESAMLSQEFREDLYYRLNVVN
LELPPLRERPEDIPLLARHFLSQAAQRHNRKVRGISPGALHLLAQAAWPGNVRQLENVME
QVVALSPSPIIPEGLVSKALTNQERVIPSFNEARADFERRYLIKVLQITEGNVTHAARIA
QRNRTDFYKLLNKHDLEAAEFKASAKAALAAQQEALKQVDKKRKAG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaacccccaacatcctactggtcgatgacgataccgcactacttaagctgctg
gaaatgcgactgcaggcatccggttatgagatcagctgcgcggaaagcggtgaagaagca
ctgggcctgatccgccagtacagctttgacctggttctgactgacctgagaatggatggc
atggacggccttacgcttttctctcgcatccaacaggaacagcctgacctgccagttatc
atcatgaccgcccacggctccattcccgaggccgtcgaggcgacccagaaaggggtcttc
ggttttctgtccaagccgatcgacaagcagcacctgctggatacagttcgagcggcactg
aaaagctcccagcgcaatctggaccaaagctggcgagcaagcatcatcagccacagcgac
cgcatggagcagattcttgaccaggcacagcgtgtggctgcgtctgatgtcagcgtactg
attaccggtccgagcggcagcggcaaggaactggtcgccaaggcgatccataaagccagc
gcgcgcggcgataagcctttcgttgccatcaactgtggcgctttgcctgaacagctgctt
gagtccgagctcttcggccataccaagggcgcgtttaccggtgccgtcaatcagcatgag
gggctgttccgtgccgctcagggcggaaccctgtttcttgacgaaataggcgacatgccg
atcactcttcaggtgaaactgctgcgcgcgcttcaggagcgcaccatccgccctgtcggt
tcaacccagagcgtgccgatcgatgtccgaatcatttcggcaacccatcgcaatctggaa
tccgccatgttgagtcaggagttccgtgaagacctctactaccgcctcaacgtggttaac
cttgaacttccgccactgcgagagcgcccggaagatatcccgctgctggcacgtcacttc
ctgtcgcaggcggcacagcgtcataatcgcaaggtacgaggcatctcgccgggtgcgctg
cacctgctggcacaggcggcctggcccggaaacgtgcgccagctggaaaacgtgatggaa
caggtggttgccttgagcccatcaccgatcattccggaaggactggtatccaaggcgctg
accaatcaggaacgcgttattccatctttcaatgaagcccgcgcagactttgagcgccgc
tacctcatcaaggtgctgcagattactgaaggcaacgtgacccacgcagcacgcattgca
cagcgtaaccgtaccgacttctacaaactgctgaacaaacacgatcttgaagcggcagag
ttcaaggcaagcgccaaagcggctctggcggcacagcaggaagccctgaaacaggtggac
aagaagagaaaggctggctaa
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