Marinobacterium sediminicola: LN244_06045
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Entry
LN244_06045 CDS
T07998
Name
(GenBank) Ig-like domain-containing protein
Organism
msec
Marinobacterium sediminicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Cadherin_5
P_proprotein
CshA_repeat
Cadherin_3
Tli3
Lipase_C
Motif
Other DBs
NCBI-ProteinID:
ULG70373
LinkDB
All DBs
Position
1299166..1307400
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AA seq
2744 aa
AA seq
DB search
MSTPNNKPGAVLPNLMQLEQRLMFDGAAVEASIDTLADHVADQQAVETADDMFSLAVAHG
QTQQAADQAQQQIKNYFERASAEELFQLFNGGKDTLDAQWLQSMEALRQSILSGEYQIRV
ELLDSDTIKGALGAFAAEGTDGEPTIYLNREWVEGIAGERDIVKVLVEELGHSIDSLVNA
GGDTAGDEGEAFAAAVAGTEQNGVISTDASATLDIDGETVEVEFATYDFQTAYAIVVDIE
NNAEAQDWIPDENFEYAIDKESNTHNFIYTANGLGSVTVIDDTDSRYFSGNDVSAIGINI
GGETYYGWISRPIKVQGEVKGFYFWTDTDFVDFSTAQADGNQDGDSSTVDNRGFILAVDK
AYFDGLGFVSRSGVASDTYKVIGSSSDRVDNALNALIDSNTAPVAQDVTSGTSSGTTAAI
EQGYGVAGQNAGGNVLDFASDADNDTLSVIAVGPGNGAVQTAVGETPVVLNGQYGTLTLN
ADGTYTYVLNNTLPQVDALNVGDQLSDQFTFTISDGKGETDSAILTIRIDGTNDEPTANP
DYNQAKESTTLIGSGFDYTGYGASGNVLGNDADVDDQGAELSIQGVQVSGSLSSDNVTVE
SGTLSLQFSSGSGFAAVKIGDYLYVSVDGTAAGSGDGTGNYVALYAADDSAITITVKGTD
ALGNDVLEFSAVPAAYYGASGNIAINDVEAFFQANAWVAGNSNLMTTTQDGGQTKVAQLA
VASTTGSTTLSNVSSLDGTIAVGMSVTGAGVPAGTRVESLEYTNGILTGVVLDAELTDTT
GGEFTFTGDAGVTQTLQGAHGELVLQADGTYTYTPFTDNPLLAEGESAVEVFDYTMRDSA
GVESTSTLYITVYGTGSNDPYLGHDNGTAVESGIDAGGSTIGSDATGNVLNNDQDIFNGA
TPGLNKVTQVAVQGSGASTISSGSSAVISGEYGSLTLASDGTYTYAVNDSLAVVDALAPG
ESLTEVFTYQVTNGFSKTSWATLTITISGSNDAPVAVADTNTIRENAVVPVTGSVLSNDS
DVDNGDSLSVTGIGTTSADTAVTGGTTGVDGTDVTGTYGTLTIGADGSYSYAVTAEIAAG
MDVDDVFTYEVRDTNGGITTKTLTITVSGGNEPPINAYPTVVTTTGTDPIVFTGGTEISV
ADQDGNLSWVVLKVDNGVLSVTPGSASVDGEVTSELRITGTQSEINAALATLIYQADTAF
AGTDYLTIMSQDSDFANDSDSVEIVVEETLAVNGYGPVNEGSQYAMFEVTGYNGQTVELA
IENDTATLTSPTIEYSTDGSDWADYGVGTEPVMPANGTLYVRVDISSEHDTVYEGTENFK
LIATDKNVDGLTAEAVTAIIDDGSGTKYGPGMPGGTPTTDTTSLDDDRSLAVSGYGPVNE
GSQYAMFEVTGYNGQTVELAIENDTATLTSPTIQYSTDGSDWANYGVGSEPVMPANGTLY
VRVDISSEHDTVYEGTENFKLIATDKNVDGLTAEAVTAIIDDGSGTKYGPGMPGGTPATD
TTGLDDDRPVISINNTSVIEGQAAQFKVELSNPSSEDITFTPSLAGVSAALGSDTHAANT
LEVSTDGGATWTMVVTDVTIAAGETSLLLRLGTSDDTEIEVAETFTLSTGTVSGTVANAE
GVTGTATIGDNDAANTPPELADTNLTLTVAEDAAAPTGAVGSLLGDFTGGISDADGGALK
GIAVTGIDSSRGTWYYSLDDGATWSEVGTVSETSALLLADDGSTRLYFQPTPNFNGDVAS
GLTFKAWDRTEGTAGTQVDTTPVDTTSSYTSTGGIVIPGTGSGSITELSALDISGLTGSL
ADINVTLNGLSHAWPQDMDILLVGPEGQQVILMSDAGGNSTNAISDLTLSFDDEASADLP
PTGNALSGGAYKPANLIDNEDPSDPDLFDGISGSFASQLAAFDGTDPNGTWTLYIADDYV
DNHGGSLTNWTLTLTMSGQGSPFSTATDTISVSVTAVNDAPLASGSSSLPSISEDSDNPP
GDTVANLFTPNFDDQTDEVSGGSSANTLAGIAIIDYTEDTGKGQWQYSTDAGGSWTTLGS
INGDASALTLDATAMLRFVPAADYHGDAPDVTVRLIDSSTSVINAATVDVSSNGGITAVS
ADTVVLSTSVTAVNDLPTGTDDSVTTPEDTPVVLTAGDFGTFADVDGGTLVKLQITTLES
SGSLEYFDGTNWNPVTLNQEITKADIDAGKLRFVPGADENGSPYTTAGFKVSDGTAYSAD
AYTLTVNVTPENDDFTDDNETLNVNEDSGETTGTLLSGTSSVDGPVTVKSFTIAGESGLF
TLDSAYSVAGKGTITVYTDGSYSFTPAANWHGTFPVVSYVLTDGSGSDDTSTLAITVDSV
NDDFTDDNETLNVDEDSGETTGNLLIGTSSNDGPVTVKSFSIAGESGPFTLSAVYSVAGK
GSITVNADGSYSFTPVGNWNGVFPVISYVVSDGSGTDDTSTLTITVDPVNDVPVFVGQSG
PLGDDISVVTPEGTPVGGTLEAEDPDGDDLTFEKATDPTNGTVTVDPEGNWVYTPNPGYS
GNDSFTVTVSDGKGGTDIITVNVEVTPKPVVIPPPAPAEPTPTPDVPPPPPVEIPEMPRV
EAVVEPAPVPEIGQLIVQRDIPEQNFVSSNGITLISFTIPTDTFGHTEPGAEITLSAVLA
DGRDLPDWLLFDPEKGEFRGVAPKGFDGTLIIRVIARDQDGNQVETMVTIQVRSEQAETA
DVMHDGKSGLMQQLQANSQFAWKAERDRLIHLARAAAEERSGNA
NT seq
8235 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccccaacaacaaacccggtgctgttttacctaacctgatgcagttggagcag
cgcctgatgtttgatggtgctgctgtcgaagccagcatcgataccctggcagaccatgtt
gctgaccagcaggctgtggaaacggctgatgatatgttcagcctggcggtggctcacggt
cagacacagcaggcagctgatcaggcgcagcagcagatcaagaattactttgagcgtgcc
agtgccgaggagctgtttcagctgttcaacggtggtaaggacactttggatgcccagtgg
ctgcagtcgatggaagcactgcgtcagtcgatcctgtctggagaataccagatcagggtc
gagcttctggacagcgacaccatcaagggggcgttgggtgcgtttgccgccgaaggtacg
gatggcgagccgaccatctacctgaaccgcgagtgggttgaaggtattgccggggagcgg
gacatcgtcaaggtgctggtggaagaactgggccacagcatcgacagcctggtcaatgcg
gggggggataccgcaggggacgagggtgaagcgtttgctgcagcggttgccggtaccgaa
cagaatggcgtgatttcgactgatgcgtcagcgacgctggacattgacggcgaaactgta
gaggtagaattcgccacctatgacttccagacggcatacgcaattgtcgttgatatcgag
aataacgctgaagcacaggactggataccggacgaaaacttcgagtatgcgatcgataag
gaatcgaatacccataacttcatttacacagctaatggtctgggctccgtaaccgtcatc
gatgataccgacagccgctacttcagtggtaatgatgtctctgccatcggtattaacatc
ggcggagaaacgtactacggctggatcagtcgtccgatcaaggtgcagggtgaggtcaag
ggcttctatttctggaccgacaccgattttgttgatttctctaccgcgcaggcggacggg
aaccaggatggcgacagcagtacggtggacaaccgcggcttcatcctggcggtcgacaag
gcatactttgacggccttgggtttgtgtctcgttcaggtgtcgcttccgatacctacaag
gtcattggatcatcttcagaccgcgtcgataatgcgctgaatgcgctgatcgatagcaat
acagcacctgttgcccaggatgtaacctcgggaaccagtagtggtacaactgcggccatt
gagcagggttatggtgttgcaggccagaatgctggggggaacgtactcgactttgccagt
gatgctgacaatgacacattatccgtcatagctgttggccccggaaatggtgcggttcag
actgcagttggtgaaacacctgttgtactcaatggccagtacggcacattgacgctgaat
gccgatggcacgtacacctatgttttgaataatacgcttccccaagtggacgccttgaat
gttggcgatcagctaagtgatcagttcacttttaccatcagtgatggcaagggcgagact
gacagtgcgattctgacaattcggatcgacggtaccaatgatgagccgacagccaatccc
gattacaaccaggccaaggagtcaacgactttaatcggcagtggttttgactacacaggc
tatggggccagtggcaatgtgctggggaacgatgcggacgtagatgaccagggagctgaa
cttagtatccagggggttcaggtttcaggcagcctgtcttctgacaatgtcactgttgag
tcaggtacgctttctctgcaattcagttcaggcagtgggtttgcggcagtcaagattggt
gactatctgtatgtcagtgtggatggtacagctgctggctctggcgatggtacgggcaac
tatgttgcactatatgctgctgacgatagcgccatcaccatcacggttaaagggacagac
gcattaggcaatgatgtgctcgaattctccgcggtgccggccgcatactatggcgcaagt
ggaaatattgccattaatgatgtcgaagcgtttttccaggctaatgcttgggtggctggt
aatagtaatctcatgactaccacacaggatggtgggcagaccaaagttgctcagcttgct
gttgcgtcaacgactggtagtacaacgttgagcaatgtttcaagtttggatggcaccatt
gcggttggcatgtcagtgacgggcgctggggtacctgcgggtactcgggtcgagagtctt
gagtacaccaacggcattctaacgggtgtggtacttgatgccgagttgacagatacaact
gggggcgaattcacttttacaggcgatgctggtgttactcaaaccttgcagggagcacat
ggtgagctggtgctgcaggccgacggcacctacacctatacgccattcacggataaccct
ctgctggctgaaggagagtctgcggttgaggttttcgactacaccatgcgggatagtgcc
ggtgttgagagcaccagcacactttacattactgtttacggtacaggttcaaatgaccct
tacctggggcacgataatggcacggccgttgaatccggcattgacgctggtggaagcact
ataggctctgatgcaaccggcaacgtgctgaataatgatcaggacattttcaacggtgcc
actcccggtctgaataaagtcactcaagttgcagtgcaaggctccggtgccagtacgatt
tcgagtggcagctctgcggtcatcagtggcgagtacggcagcctgacactggcttcggat
ggtacttatacctatgccgtgaacgacagtcttgccgtcgtggatgcgctggctcctggg
gagtcactgaccgaggtattcacttaccaggttaccaatggattttcaaaaaccagctgg
gcgacgctgacgatcacaatttccggctcaaacgatgctcccgttgctgttgctgatacc
aataccattcgtgaaaatgccgtggtgccggttactggctccgtactcagcaacgattcc
gacgttgataacggagactctctgagcgtcaccggaatcgggaccacctctgcagatacc
gccgttaccggtggtacaaccggtgtggatggcacagacgttaccgggacatacggtacg
ctgaccatcggagctgacggcagttactcctatgcagtaaccgccgaaattgcagcgggt
atggatgtggacgatgtcttcacctacgaggttcgtgataccaacggcggtataaccact
aaaaccctcaccattaccgttagcggaggtaacgagcctccgattaacgcctatccgacc
gttgtcaccacaaccggaaccgacccgattgtttttactggcggcactgaaatcagcgtg
gctgaccaggacggtaacctttcctgggtcgtgcttaaagtcgataacggcgttttgagc
gttacgccaggctcggccagtgtcgacggtgaggtcacaagcgagcttcgcatcactggt
acacagagcgagattaatgcggcgttagcgactctgatttaccaggccgacactgcgttt
gcaggtacagactacctgacgatcatgagtcaggactctgactttgccaatgacagtgac
agtgtcgaaatcgttgtggaagagactctggcggtaaacggctacggcccggtgaatgaa
ggttcccagtacgccatgttcgaagtgaccggctacaacggccagacggtcgagctggcg
atagagaacgacacggcgacgctgaccagtccgaccatcgagtactccaccgatggcagt
gactgggccgattatggagtgggcaccgaaccggtgatgccagccaacggcacgctgtac
gtgcgcgtggacatcagcagcgagcacgacaccgtctacgaaggcactgaaaacttcaaa
ctgatagccacggacaagaacgtggatggcctgactgcggaggccgttactgccatcatt
gatgacggcagcggcaccaagtatggcccgggcatgccgggcggtacaccgacgacggat
acgacaagcctggatgatgatcgcagtctggcggtgagcggctatgggccggtgaacgaa
ggctcccagtacgccatgttcgaagtgaccggctacaacggccagacggtcgagctggcg
atagagaacgacacggcgacgctgaccagtccgaccatccagtactccaccgatggcagt
gactgggccaattatggagtgggcagcgaaccggtgatgccggccaatggcactctgtac
gtgcgcgtggacatcagcagtgagcacgacaccgtctacgaaggcactgaaaacttcaaa
ctgatagccacggacaagaacgtggatggcctgactgcggaggccgttactgccatcatt
gatgacggcagcggtaccaagtacggcccgggcatgccgggaggtacgccggctacggac
accaccggtctggatgacgaccgtcccgttatcagcattaacaatacctccgttatcgaa
ggccaagcggctcagttcaaggttgagctgtcgaatccttcatcagaggacattacgttt
acgccgagccttgcgggtgtgtcggctgcacttggatccgatacccatgcagccaataca
cttgaggtatcgactgacggcggtgccacatggaccatggtggttactgacgtcaccatt
gccgcaggtgaaacaagcctcctgctccgccttgggacaagcgacgataccgaaattgaa
gtggctgaaacctttaccctgtcaacgggcactgtctccggtacggttgcaaatgcggaa
ggggtaaccggtacagcgacgattggtgacaatgatgcggctaacaccccgccagaactt
gccgataccaacctgacgctgactgtagccgaggatgcggctgcacccactggagcagtt
ggttctctgctgggtgattttaccggcggtatcagtgatgccgatggcggtgcgcttaag
gggattgcggttaccggcatcgactccagcagggggacttggtactactcgttggatgat
ggcgctacctggagcgaagttggtactgtcagtgaaaccagtgcgctgctgctggcagat
gacggcagcacccgtctctacttccagcccactcccaatttcaatggtgatgttgccagc
ggcttgaccttcaaggcctgggatcgcacggaaggtacggcaggcacacaggttgatacg
actcctgtagatacaacatccagctatacctcgactggcggtatcgtgatacccggcaca
gggtcaggaagcataacggaactctctgcgctggatatttcgggccttacaggttctctg
gctgatatcaacgttaccctgaatgggctcagtcatgcctggccccaggatatggatatc
ctgttggttggccctgaaggccaacaggtcatactgatgtcagatgcaggtggaaatagc
acgaatgccatttccgacctgactttgtcgtttgatgatgaagcaagtgctgatctgccg
ccgacaggaaatgcgctgtcgggcggagcctataaaccggctaatttgattgataatgag
gatccgtccgatccggacttgttcgatggcatcagcggcagctttgccagccaacttgca
gcctttgacggtacagatcccaacggtacatggacgctctatattgctgatgattatgtt
gataatcatggtgggagtcttaccaactggacgttaactctgactatgagtggccagggc
tctccattcagtacagcgactgataccatcagcgtgagtgtgacggcggttaacgacgca
ccgctggcttccggcagcagctccttgccatccatttcggaggattctgacaatccgcca
ggggatacggttgcgaacctgttcaccccgaattttgatgaccagacggatgaagtatcc
ggcggcagcagcgccaatacgctcgccggaattgccatcattgactacaccgaagatacc
ggcaagggtcagtggcagtacagcacggatgctggtggctcctggaccacactaggcagt
atcaatggcgatgccagtgcgttaacgctggatgcaacggccatgctgcgctttgtcccg
gcagccgattaccatggtgatgcccctgatgtgactgtacggttgattgacagcagtacc
agcgtcatcaatgcggctactgtcgatgtcagcagtaatgggggtattactgccgtctct
gccgatacggtagtgctttccaccagtgtgacggccgtcaatgacctgccgacaggtacg
gacgacagcgtcaccacgcctgaggacacccccgttgtgttgacggcaggcgatttcggt
acttttgccgatgtggatggcggcacgctcgtaaaactgcagatcacgactcttgagagc
agcggcagcctggagtacttcgatggcacgaactggaacccggtgacgctgaatcaggag
atcaccaaggccgatatcgatgcaggcaagttgcgttttgtccccggagccgatgaaaac
ggcagcccttacacaacggctggttttaaagtgagtgacggcactgcctacagtgctgat
gcctatacgcttaccgtcaatgtcacgcctgaaaatgacgacttcaccgacgacaacgaa
accctgaacgtgaacgaggatagcggtgaaaccaccggtactttgctgagcggtaccagc
agcgtcgatggcccggtgacggtgaagagcttcaccatcgcgggtgagtcaggactgttt
actttggacagtgcctacagcgtggctggcaaagggacgatcaccgtctataccgatggc
agctacagcttcacgccggcagcaaactggcatggaaccttccccgtagtcagctatgtg
ctgaccgatggctcgggttcggatgacacctctaccctcgcgataactgttgattcggtg
aatgatgatttcaccgacgacaatgaaactctcaacgtggatgaggacagcggtgaaact
accggcaatctgttgatcggtaccagtagcaacgatggcccagtgacggtgaagagtttc
agcatcgccggtgagtctggaccgttcacattgagcgctgtctacagcgtggcaggtaag
gggtcgatcaccgtcaatgccgatggcagctatagcttcacgccggtaggtaactggaac
ggtgtgttccccgtcatcagctacgtggtgagcgatgggtcgggtacggatgatacatcc
accctgacaattaccgttgatccggtgaatgatgtaccggtatttgtaggccagagtggt
cccttgggagatgacatcagtgtggttacgcctgaaggtacaccggtgggcggcaccctg
gaggctgaagaccccgatggtgatgatctgaccttcgaaaaggcgaccgatccgaccaat
ggaacggtcaccgtcgatcctgaaggaaactgggtctataccccgaacccgggctattcc
ggcaatgacagcttcactgtaactgtcagcgatggcaaaggtggcaccgacatcatcacg
gtcaatgtcgaagtaacgccgaagccggtggtaataccgccgcctgcgcctgcagagccg
acaccgacaccggatgttccgccgccgccaccggtcgagattccggaaatgccgcgagtg
gaagcggtagtcgaaccggctcctgtgcctgagatcgggcagctgattgtccagcgtgac
attccggagcagaactttgtctccagcaacggtatcacactgatcagcttcaccattccg
accgataccttcggtcatacggaaccgggtgcagaaatcaccctgtcagccgtgttggct
gatgggcgcgatcttccggattggctgctgtttgaccccgagaagggcgagttccgtggc
gtagctcccaagggctttgatggcactctgattatccgcgtgattgcgcgtgaccaggat
ggcaaccaggtagagaccatggtcacgatccaggtgcgttcggagcaggcggaaaccgct
gatgtgatgcacgacggcaagagtggattgatgcaacagctccaggccaacagccagttt
gcctggaaagcggaacgtgaccgcctgatccacctggcacgtgctgctgcagaagagcgg
agtggcaatgcctga
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integrated database retrieval system
