Marinobacterium sediminicola: LN244_06075
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Entry
LN244_06075 CDS
T07998
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msec03400
]
LN244_06075
DNA repair and recombination proteins [BR:
msec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LN244_06075
Archaeal homologous recombinant proteins
LN244_06075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
DUF6432
ABC_ATPase
AAA_21
RsgA_GTPase
nSTAND3
GTP_EFTU
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ULG70379
LinkDB
All DBs
Position
1313778..1316843
Genome browser
AA seq
1021 aa
AA seq
DB search
MRILQIRFKNLNSLSGEWQIDLTEPAYTADGIFAITGPTGAGKSTLLDAICLALYGRTPR
QSRVNASQNEVMSRQTGECFAEVVFETPQGRWCCHWSQHRSRKRPDGSLQQPRHEVSEAD
TGKVLVTRLKDVADTIERLTGMDFDRFTRSMLLAQGGFAAFLQADPDERAPILEQITGTS
IYSDISIAVHRRKGEEKQKLEQLKAAQLGLQLLDDDEEATLSRELAALDEQVREQQQQVE
HQQSLVNWRLQLDREHEQLKRLQQDQERLDQDWQAFTPQQQVLEQALKAEALRPDFAPLC
QRRRDLAQAQEGMSRLQAQLPELEKSTHQAGVQLDRAVQHRQQAEEELERQQPLLRQLRE
QDYAIGLKQKELQQMRAQLPADVLQGPAPDPDLLVTAIQQTESELKVLLGNDNRDELKQQ
QEEIRTRGESLGELRGLVRQSDELTQEHQALVAGLAEQDRQQQLGQEQLLQVRKEIETLL
REQQDLQKLQRLADRIADLEQQRHELEAGKPCPLCGSTEHPWRSQHPPELSEEKARLHTL
ESRLATRQSELQQLEIGQARLLAQIGSQRQQTERLLQKLQALESPIQQCLQPLGWQTCPS
REVIEQAYRDTGEHWKQLKQRLDRIDALEVEQKRQQQEQQRQQQRLAVDGVEAELAELRQ
QRAALSPEPDTDALEKRLQASVVQARTVQEQAQAEAHRCEQMLNQRRLQISDSEASMRRL
QDETEQMQSAFMQALSQSQFKDEAQLQAALKPAEQLQQLQRQAEMLKSRGAELKALRDRC
EQAVTVLQQQALSNEPIEHLEDALQQLKAHQAQLLQQRGSLQQQLSRNESLKQQFGEQQR
AIDAQQRELSRWEQLHELIGSADGKKFRNFAQGLTFELMVGHANRQLQKMSDRYLLVRDA
EQPLELNVIDNYQAGEIRSTKNLSGGESFLISLALALGLSGMASRNVRVDSLFLDEGFGT
LDEEALETALDTLSGLQQEGKLIGVISHVQALKDRISTRIEVSPVSGGRSRITGPGCRRL
D
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatacttcagatccgttttaaaaaccttaactccctgtctggtgagtggcagatt
gacctgacggagcctgcctatactgccgatggcatctttgccattaccggccctacaggg
gctggcaagtcgacgctgcttgatgccatctgtctggcgttgtatggacgcacgccccgg
cagagccgcgtcaacgccagtcagaatgaagtgatgtcgcgccagacgggagaatgcttt
gcggaggtggtgtttgaaacgccccaaggacgctggtgctgtcactggagtcagcaccgc
agccgcaaacggcctgatgggtcgttgcaacagccaaggcatgaggtctccgaagcggac
acaggcaaggtactggtcaccaggctcaaggatgtggccgataccatcgagcgcctgacc
gggatggactttgaccggtttacccgttcgatgctgctggctcagggaggctttgcggct
ttcctgcaggctgaccccgatgagcgagcccccattctggagcagattaccggcacttcc
atctattccgacatctccatcgccgtgcatcggcgcaagggggaggaaaaacagaagctg
gaacagctcaaggcggcacagttaggcctgcagctgttggatgatgatgaagaagcgacc
ctgagccgcgagttggcggcactcgatgaacaggtccgcgagcagcaacagcaggtggag
catcagcaaagcctcgtcaactggcgcctgcagctggatcgggagcatgaacagcttaag
cgtctgcagcaggatcaggaacggctggatcaggactggcaggctttcacgcctcagcag
caggtgctggaacaggcactgaaagcggaagcgcttcgtccggattttgctccgttgtgt
cagcggcggcgtgatctcgctcaggcacaagaggggatgtcccggctgcaggcacaactt
cctgaacttgaaaaatccactcatcaggccggtgtgcagttggacagggcggttcagcac
cggcagcaggctgaagaggagctggaacgtcagcagcctctgctcagacaactgcgtgag
caggattatgcgattggcttgaagcagaaagagctgcagcagatgcgtgcacaactgccg
gccgacgtgctgcaaggaccggcacccgaccccgatctgctggtgaccgccatacagcag
accgaatccgagctgaaagtgctgcttggcaatgacaaccgcgatgagctgaaacaacag
caggaagagatccggacacggggcgagagcctcggtgagttgcgtggtctggtgcgtcag
tcagacgaattgacacaggagcatcaggccctggtggcagggctggctgagcaggatcgg
cagcagcagctgggacaagagcagctgctgcaggtacgcaaagagatcgaaacattgttg
cgcgagcagcaggacctgcaaaagctgcaacggctggctgatcgaatcgccgatctcgag
cagcaacggcatgagctggaagccggaaagccctgcccgctgtgtggttccacagagcat
ccctggcgcagtcaacacccgcctgaattaagtgaggagaaggctcggctgcacacactt
gagtctcgattggccactcggcagtctgagttgcagcagcttgagatcgggcaggctcgt
ctgctagcacagattggcagccaaaggcagcagactgagaggctgctgcagaagctgcaa
gcgctggaatcgcctattcaacaatgcctgcagcctttgggctggcagacgtgccccagc
cgtgaggtgatcgagcaggcatatcgggacaccggagagcactggaagcagctcaagcag
cgattggatcgcattgacgcacttgaagtcgaacaaaaacggcagcagcaggagcagcag
cgtcagcagcaacgcttggccgtggacggtgtcgaggctgaattggccgaattgaggcag
caacgcgcggccctttcacctgagccggatactgacgccctggaaaaacgcttgcaggct
tcggttgtgcaggcacgcacggtgcaggagcaggcgcaggccgaagcgcatcgctgcgaa
cagatgctcaaccagcggcgcctgcagatcagtgacagcgaagcgtccatgcggcgtctg
caggatgaaaccgaacagatgcagtcggcgttcatgcaggcgttgtcgcagagccagttt
aaagatgaagctcagctgcaggcagcactgaaaccggctgagcagttgcagcagttgcag
cgtcaggctgaaatgctgaagtccagaggggcagaactgaaggcgctgcgtgatcgctgt
gaacaggccgttaccgtgttgcagcaacaggcattgagtaatgagccgattgagcatctg
gaagacgcattgcagcagttgaaggcacatcaggcccagttgttgcaacaacgcggcagt
ctgcagcagcagttgagtcgcaacgaatcgctcaagcagcagtttggcgagcagcagcga
gcgatcgacgcccagcagcgtgagctcagtcgctgggagcagctgcatgaactgataggc
tcggctgatggcaagaaattccgcaactttgcgcaggggctgacgttcgagctaatggtg
ggtcatgccaaccggcagctgcaaaagatgtcggatcgctatctgctggtacgggatgcc
gaacagccactggagctgaacgtaatcgacaactatcaggctggcgaaattcgctccacc
aagaacctgtccggaggtgagagcttcctgatcagccttgcgcttgcgctgggtctgtcc
ggcatggccagccgcaacgtgcgggtggattcactgttcctggatgaggggtttggcact
ctggatgaagaggcgctggaaacggcgctggataccctgtctggactgcaacaggaaggc
aagctgatcggggtgatctcgcatgttcaggcgctcaaggatcgcatcagtacgcggatt
gaagtgtcgccggtcagtggtggtcgcagtcgaattacagggccggggtgtcgacgcctg
gattga
DBGET
integrated database retrieval system
