Marinobacterium sediminicola: LN244_06100
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Entry
LN244_06100 CDS
T07998
Name
(GenBank) PAS domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msec
Marinobacterium sediminicola
Pathway
msec03030
DNA replication
msec03430
Mismatch repair
msec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LN244_06100
03430 Mismatch repair
LN244_06100
03440 Homologous recombination
LN244_06100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msec03032
]
LN244_06100
03400 DNA repair and recombination proteins [BR:
msec03400
]
LN244_06100
Enzymes [BR:
msec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LN244_06100
DNA replication proteins [BR:
msec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LN244_06100
DNA repair and recombination proteins [BR:
msec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LN244_06100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
PAS_4
PAS
PAS_8
DNA_pol_A_exo1
Relaxase_C
PAS_10
PAS_9
Exosortase_EpsH
Motif
Other DBs
NCBI-ProteinID:
ULG70384
LinkDB
All DBs
Position
complement(1321273..1323312)
Genome browser
AA seq
679 aa
AA seq
DB search
MPSRQNLIGLWLLLTGLCLVAGLGVLIWLEGALQPSPETRPLLWCLGLAPTVLSLLVGWQ
LERRLFRPLRQFQVLLARLVASPDAQGDYPVDGWLQPLQPDLDHIREGWRQDRVKIREAH
AEGAREAEKIKQELEALLQVLDLPLLICDRHQRLLLFNPAAAEMFHDQPGLGLGRPLSQL
LPHPSLADAIRHLPDDGTPHQLLLPGEHHWLRCQLRRLGAYHGGALITLQDTTAALEHDQ
RWRRTLAQLLPKLRGHCGSLNSATEALLQVEDNPTFKQRLESAIEQESQALATQVEQLTH
LVEAQQLSQSALEETWSNDLCSALKAQLLQHQIRLTPIGIPAWMKVDGPALLALLQLLVR
QLSSLQRIDEVELEVLLGNRRVYVDLSWDGIPLSEQQLQQWRSLPLFDEPLSPRVEDVLD
QHGADLWSIPPQQPGEGPRLRLPLPASGRGIQPLQRLSPRPEFHDFSIADLPAPSGDLAS
LPLQQLEMVVFDTETTGLDLRRGDRIISLAACRILNGRLLADDVFDQRVNPQRAIPPEST
AIHGLKDEDVAQSPPIEVVLPRFRHYVGDGVLVAHNAVFDLLALQLSESGDQSRFTMPVL
DTLLLSRAIDPSLEGHGLDALAERFDLSFPPGTRHTALGDARVTAELLLLLLPRLANRGV
RTLGDALELQRQIEQEQHR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcccgtcagaacctgatcgggctctggctgctgctgaccggcctctgtctggta
gccggcctgggcgtactgatctggctggaaggcgctcttcagccctcccccgaaactcgt
cccctgctctggtgccttgggctcgcccccacggtgctcagtcttctggtcggttggcag
ttggaacgacgcctgttccgccccttacgccagtttcaggtgctgctggcccgtctggta
gccagccccgacgctcagggggactacccggtggatggctggctgcaaccgctacagccg
gatctcgaccatattcgtgagggctggcgtcaggatcgcgttaagatccgagaagcccat
gctgaaggcgcgcgcgaggcggaaaagatcaagcaggagctggaagcactgctgcaggtg
ctcgacctcccgctgctgatctgcgatcgccatcaacgcttgctgttattcaacccggct
gcggccgagatgttccatgaccaacctgggctgggtctgggtcgccccctgtcgcaactg
ctgccacaccccagtctcgccgatgcgatccgccaccttcctgatgacggcacgccacac
caattgctgctccccggggaacatcactggctgcgctgtcagttgcgccgactgggcgcc
taccacggcggtgcgctgatcacgctgcaagacaccaccgccgctctggagcatgatcaa
cgctggcgtcgaacgctggcccagctgctgcccaagctgcggggccattgcggtagtctg
aacagcgccaccgaagcgttgctgcaagtggaggacaacccgaccttcaaacaacgactg
gaaagcgccattgagcaggaaagccaggcgctggccactcaggtcgagcagctgacccat
ctggttgaagcccagcaactcagtcagtccgcactggaagaaacctggtccaatgacctg
tgcagtgcattgaaagcccaactgctgcagcatcaaatcaggctgacccccattggtatc
cccgcctggatgaaagtagacggccccgccctgcttgctctgttgcagttgctggttcga
cagttgagcagtcttcagcggattgatgaggtggagctcgaagtcctgttgggcaaccgc
cgggtatacgtcgacctgagctgggatggcattcccttaagcgagcagcagctgcagcag
tggcgctcgctgccactgttcgacgagcccctgtcaccgcgtgttgaggatgtgctcgac
cagcacggtgcagacctgtggtcgataccgcctcagcaaccgggtgaaggcccccgcctg
cggctgccgttaccggcatcaggccggggcatacaaccgctccagcgtctctcgcctcgc
cctgaattccatgatttcagcatcgccgacctgcccgcacccagcggtgacctggcatcc
ctacccctgcagcagctggagatggtggtattcgacaccgaaaccaccgggctggacctg
cgccggggcgacaggatcatcagcctcgcggcgtgccgtatccttaatggacgcctgctg
gccgatgatgtgttcgaccaacgggtgaaccctcagcgtgccattccgcctgaaagtacg
gcgatccacggtctgaaggatgaggatgtggctcaatcgccccccatcgaagtggtcctg
ccccgtttccggcactatgtcggcgacggcgtactggtcgcacacaatgccgtgttcgac
ctgctggcgctgcagctgtccgaaagcggcgaccagagccggttcaccatgccggttctg
gatactctgctgctgtcacgagccatcgatccctcactggaaggccacgggctggacgcg
ctggccgaacgattcgacctcagctttccgccgggcacgcgtcacacggcgcttggtgat
gcccgcgtgaccgctgaactgctgttgttgctgctgccacggctggccaaccgtggcgtg
cgtacactgggtgatgccctggaactgcaacggcagatcgaacaggagcagcatcgatga
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