KEGG   Marinobacterium sediminicola: LN244_06220
Entry
LN244_06220       CDS       T07998                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
msec  Marinobacterium sediminicola
Pathway
msec02020  Two-component system
Brite
KEGG Orthology (KO) [BR:msec00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LN244_06220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:msec02022]
    LN244_06220
Two-component system [BR:msec02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LN244_06220
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_16 AAA HTH_50 FleQ AAA_2
Other DBs
NCBI-ProteinID: ULG70406
LinkDB
Position
1346459..1347826
AA seq 455 aa
MSTEGLVLLVDDEAMVREATAQWLDLSGFEVRTYSRAEAALEQIDPYCEGILLTDVRMPG
MDGIQLMQETLKKAPDMPVILLTAHGDVDMATAAMRDGAYDFIEKPYVPDRLVERIRRAC
EKRRLTLENLRLQQNLATQSGLDGRLIGISPAIQRLRREILSLAELDTNVIIYGETGTGK
ELVAQCLHDYSKRAKKAFVPINCGAIPENLIESELFGHEAGAFTHAAKRRVGKFEYASGG
TLFLDEIESMPLHLQIKMLRALQEHVIERLGANTPIPVDLRVLAAAKVDLREDPNFREDL
FYRLSVSELHIPPLRERIEDVPLLFAHYVRRGALDHDREERSLSDHDLDALQSYAWPGNV
RELKNVAIRYAIDHRASLVELLSRPQALQSQPVMNRQSLPLAVQVAEYEARLIRDALEQH
QGNIKAVMEALDLPRRTLNQKMQRYGLNRCDFTPQ
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgagtacagaaggactggtgctgctggtcgatgatgaagccatggtgcgtgaagccact
gcgcagtggctggacctgtcaggcttcgaggtacgcacgtacagccgtgcggaggcggcg
cttgagcagattgacccctattgtgaaggcattctgttgaccgatgtacgcatgcccggc
atggatggcatccagttgatgcaggaaacattgaaaaaggcccctgacatgccggtgatc
ctgctcacggcgcacggagatgtggacatggcaacggctgccatgcgtgatggtgcctat
gacttcatcgaaaaaccctatgtgcccgatcgtctggtcgagcggatccgccgtgcctgt
gaaaaacgccgattgacgttggagaacctgcggctgcagcagaatctcgctacccagagc
ggtcttgatggacgtttgatcgggatttcgccggccatacagcgtctgcgcagggaaatt
ttgtcactggccgagctggataccaacgtcatcatttatggcgagaccggaaccggcaag
gagctggtggcccagtgtctgcacgactacagcaagcgggctaaaaaagccttcgtgccg
atcaactgtggtgccattccagaaaatctgatcgagagtgagctgttcggtcatgaagca
ggcgctttcacccatgcggccaagcgacgagtcggcaagttcgaatatgccagcggcggc
acattgtttctggatgagatcgagagtatgccattgcacttgcagatcaaaatgctgcgt
gcactgcaggagcatgtgatcgagcgcctgggcgccaataccccgattccggttgatctg
cgtgtgctggctgcggccaaggtggatttgcgtgaagatcccaactttcgcgaggacctg
ttttaccgactcagcgtgtccgaactgcacattccgccgttgcgcgagcgcatcgaggat
gtgccactgctgtttgctcactatgttcgccgtggcgccctggatcatgatcgtgaggag
cgttcactttccgatcacgatctggatgcgcttcagtcctatgcctggcccggcaatgtg
cgtgagctgaagaacgtcgccatccgttatgccattgatcatcgtgccagccttgtagaa
ctgctgtcgcggccacaggcattgcagagtcaaccggtgatgaatcgtcagtcgctgccg
cttgcggttcaggtggctgaatatgaagcgcgcttgattcgtgatgcgctcgagcagcat
cagggcaatataaaggctgtcatggaggcgctcgatctgccaaggcggacgttgaatcaa
aaaatgcagcgttatggtctcaatcgatgtgacttcacccctcaatag

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