Marinobacterium sediminicola: LN244_07680
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Entry
LN244_07680 CDS
T07998
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
msec
Marinobacterium sediminicola
Pathway
msec00071
Fatty acid degradation
msec00280
Valine, leucine and isoleucine degradation
msec00310
Lysine degradation
msec00362
Benzoate degradation
msec00380
Tryptophan metabolism
msec00410
beta-Alanine metabolism
msec00640
Propanoate metabolism
msec00650
Butanoate metabolism
msec00907
Pinene, camphor and geraniol degradation
msec00930
Caprolactam degradation
msec01100
Metabolic pathways
msec01110
Biosynthesis of secondary metabolites
msec01120
Microbial metabolism in diverse environments
msec01200
Carbon metabolism
msec01212
Fatty acid metabolism
Module
msec_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LN244_07680 (fadB)
00650 Butanoate metabolism
LN244_07680 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LN244_07680 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LN244_07680 (fadB)
00310 Lysine degradation
LN244_07680 (fadB)
00380 Tryptophan metabolism
LN244_07680 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LN244_07680 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LN244_07680 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LN244_07680 (fadB)
00930 Caprolactam degradation
LN244_07680 (fadB)
Enzymes [BR:
msec01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LN244_07680 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LN244_07680 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LN244_07680 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LN244_07680 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Arm-DNA-bind_1
Motif
Other DBs
NCBI-ProteinID:
ULG70676
LinkDB
All DBs
Position
complement(1671162..1673309)
Genome browser
AA seq
715 aa
AA seq
DB search
MLMEGKTIQVAAIEPGLYELIFANRDDSVNKLNQETLAELKQAISTLTAQDNLRGVLIRS
DKDSFIVGADITEFIGLFSAGPDEIQQGLQQMNAIFNSVEDLPCPTVAAINGVALGGGFE
LCLACDYRVMTQSAKVGLPEVKLGIYPGWGGTVRLPRLIGVDNANEWICTGSEQRADKAL
QAGAVDAVVAPELLREAGLELLRDCIAGDFDYQARRAEKQSPIRLNQIEQMMAFESAKGM
IGAKAGPHYPAPMTALKTIQAHANLTRDAAQAVEAKGFATLATNAVTPALVGLFLKDQQV
KRISKHYEADAQPVRQAAVLGAGIMGGGIAYQSASRGTPILMKDINEDALQLGLTEASKL
LNKQLERGKLDGTKMAASLARIRPTLSYGDFGNVDLVVEAVVENPKIKQSVLAEVEAQLP
EGAILTSNTSTISITTLAKSLKKPENFCGMHFFNPVHRMPLVEVIRGEKSSEQAIARTVA
FAKALGKTPIVVNDCPGFLVNRVLFPYFAGFTGLVRDGADYQQIDRVMERFGWPMGPAHL
LDVVGIDTAFHAGAVLAEGFPDRMAADGETVISHLFQQQRLGQKNGKGFYRYEQDRKGKP
KKLVDEELSALIQGVSAAPRDFSDEDIIARMMIPLCIEAVRCLEDGIVNTAAEVDMGLIY
GIGFPMFRGGALFYIDQMGLQAFCDLADRHADLGKLYQPTDKMRAMAAAGQTYFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggaaggaaaaacgatacaggttgccgcaatcgaacccgggctctatgagctg
atctttgccaaccgggatgacagcgtcaacaagctgaaccaggaaaccctggcggagctc
aaacaggcgatcagtacgctgaccgctcaggataatctgcgtggcgtgctgattcgaagt
gacaaggacagcttcattgtgggtgccgacatcacagagtttatcggtctgttctccgct
ggcccggatgagatccagcagggcttgcagcagatgaatgccattttcaacagcgtcgaa
gacctgccctgtcctaccgttgcagcgatcaacggtgttgcgctgggcggaggcttcgag
ctgtgtctggcctgcgactaccgtgtgatgacccagagtgccaaggtgggattgccggaa
gtcaaactgggcatttacccgggctggggcggcacggttcgtctgccacggctgatcggt
gtcgataatgccaacgaatggatctgtaccggcagcgaacagcgcgccgacaaggcgctg
caagccggtgccgtcgatgccgtggtagcacctgaattgctgcgtgaagccggacttgaa
ctgctgcgcgactgtatcgccggtgactttgactatcaggcacgccgagcggaaaaacag
agcccgattcgactcaaccagattgaacagatgatggcgttcgaatcagccaagggcatg
atcggcgccaaggcaggccctcattacccggcgcccatgaccgcgctgaaaacgattcag
gcccacgccaatttgacccgtgatgcggctcaggcggttgaagccaagggctttgccacc
ctggccaccaacgcggtcacaccggcactggtggggcttttcctcaaggaccaacaggtc
aagcgcatcagcaagcactatgaagcggacgctcagcctgtccgtcaagccgccgtgctg
ggtgccggcatcatgggtggcggtatcgcctaccagagcgcttcgcggggcacgccgatc
ctgatgaaggatatcaatgaggacgccttgcagcttggcctgaccgaggcctccaaactt
ctgaacaagcaactggaacgcggcaaactggacggcactaaaatggccgccagtcttgcc
cgcatccgtccgacactcagctatggtgatttcggcaatgtggacctggtggtcgaagcc
gtggtggaaaacccgaaaatcaaacagagcgtgctcgccgaggtggaagctcagctgcct
gagggcgccatcctgacgtcgaatacctcaaccatctccatcacaacgctggccaagtca
ctgaaaaaacctgaaaacttctgcggcatgcacttcttcaacccggtacatcgcatgccg
ctggtcgaggtgatccgcggcgagaagagttcggaacaggcaattgcgcgcacggttgcc
ttcgccaaggcactgggcaagacccccatcgtggtcaacgactgtccggggttcctggtc
aaccgggtgcttttcccctatttcgcgggctttaccgggctggtgcgtgacggcgccgac
taccagcagatcgacagggtcatggagcgtttcggttggcccatggggcctgcacacctg
ctcgacgtggtcggcattgataccgctttccacgccggggccgtgctggccgaaggcttc
cccgaccgcatggcggccgatggtgaaacggttatctcgcacctgttccagcagcagcgt
ctcggccagaagaatggcaagggcttctaccgttatgagcaggaccgcaagggcaaaccg
aaaaagctggtagacgaggaactgtccgcactgatccagggtgtttcggcggctccgcgt
gacttcagcgatgaggacatcattgcccgcatgatgattccgctgtgcattgaagccgta
cgctgccttgaagatggcatcgtcaatacagctgccgaagtggatatgggtcttatctac
ggcatcggtttcccgatgttccgtggcggcgccctcttctacatcgaccagatgggcttg
caggccttctgtgatctggccgatcgccatgccgatcttggcaaactttatcagcccacc
gacaagatgcgcgccatggccgccgccggtcagacctattttggataa
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