Marinobacterium sediminicola: LN244_07880
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Entry
LN244_07880 CDS
T07998
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
msec
Marinobacterium sediminicola
Pathway
msec00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LN244_07880 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msec01007
]
LN244_07880 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msec03016
]
LN244_07880 (serS)
Enzymes [BR:
msec01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LN244_07880 (serS)
Amino acid related enzymes [BR:
msec01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LN244_07880 (serS)
Transfer RNA biogenesis [BR:
msec03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LN244_07880 (serS)
Prokaryotic type
LN244_07880 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
KIF21A
YGR130C_N
ODAD1_CC
CC_Bre1
Baculo_PEP_C
GAS
SPC25_N
Motif
Other DBs
NCBI-ProteinID:
ULG70715
LinkDB
All DBs
Position
1713101..1714375
Genome browser
AA seq
424 aa
AA seq
DB search
MLDPKYVRANPEEVANLLKKKGYEFPVEQFVELDNQRKAIQTETETLQNERNTRSKGIGK
AKAAGEDIQPLLAEVQNLGDQLDAAKERLNDIQTQLDDLLLGVPNIPHESVPEGADENDN
VEVRTWGSPAQFDFEPLDHVALGEKNGELDFETAAKLTGSRFAVMKGKVARLHRALTQLM
LDTHVGEHGYEEIYVPYMVNADSLQGTGQLPKFEEDLFRIPFGDRDYYLIPTAEVPVTNT
VRDEIVDASNLPLRYTCHTPCFRSEAGASGRDTRGMIRQHQFDKVELVHVVEPSKSWDAL
EALTSHAEAILQKLELPYRVVALCGGDLGFSAAKTYDIEVWLPGQGKYREISSCSNMGDF
QARRMKARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQTADGKVRVPEALQPYMGG
VTEL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcccaaatatgtacgtgccaacccggaagaggtggccaatctgctaaagaag
aagggctacgagtttccggttgagcagtttgtcgagctcgataatcagcgcaaggctatc
cagaccgaaaccgagaccctgcagaacgagcgtaatacccgatcgaaagggatcggcaaa
gccaaggctgctggcgaggatatccagccattgctggcagaagtccagaacctgggtgac
cagttggatgctgccaaggagcgcctgaatgatatccagacacagctggatgacctgctg
ctgggcgtacccaatatcccgcatgagtccgtgcctgaaggtgctgatgaaaatgacaat
gttgaagtgcgtacctggggaagcccggcccagttcgacttcgagccgctggatcatgtg
gcgctgggcgagaagaacggcgagctggactttgaaaccgccgccaagctgaccggctct
cgctttgccgtcatgaagggcaaggttgcacgtttgcatcgcgctctgacccagctgatg
ctggatactcacgttggcgagcacggctacgaagaaatatacgtaccctacatggtcaat
gccgactctctgcagggcactggtcagctgccgaaatttgaggaagacctgttccgcatc
ccgttcggcgaccgcgattactatctgattccgaccgcagaagtaccggtaaccaacacc
gtgcgtgatgaaatcgtcgacgcctccaatctgccgctgcggtatacctgccacactcca
tgcttccgctccgaagcgggcgcatccggccgtgatactcgcggcatgattcgtcagcac
cagttcgacaaggtggagttggtgcatgtggttgaaccgagcaaatcctgggatgctctg
gaggcgttgacgagtcacgctgaagcgattttgcagaagctggagctgccgtatcgcgtg
gttgcactctgtggtggcgaccttggcttcagcgctgccaagacctatgacattgaggtg
tggctgccggggcagggtaaatatcgtgagatttcttcctgctccaacatgggggatttt
caggctcgtcgcatgaaagcccgctggcgtaatcctgaaacgggcaagccggagctggtg
cataccttgaatgggtcgggtctggctgttggccgtacactcgttgccgttttggaaaat
taccagactgcagatggcaaggtgcgtgtacctgaagcgctgcaaccctacatgggtggt
gtgaccgaactgtaa
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