KEGG   Marinobacterium sediminicola: LN244_09040
Entry
LN244_09040       CDS       T07998                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
msec  Marinobacterium sediminicola
Pathway
msec03030  DNA replication
msec03430  Mismatch repair
msec03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LN244_09040 (dnaQ)
   03430 Mismatch repair
    LN244_09040 (dnaQ)
   03440 Homologous recombination
    LN244_09040 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msec03032]
    LN244_09040 (dnaQ)
   03400 DNA repair and recombination proteins [BR:msec03400]
    LN244_09040 (dnaQ)
Enzymes [BR:msec01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LN244_09040 (dnaQ)
DNA replication proteins [BR:msec03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LN244_09040 (dnaQ)
DNA repair and recombination proteins [BR:msec03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LN244_09040 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ULG67868
LinkDB
Position
complement(1947567..1948295)
AA seq 242 aa
MSARQIILDTETTGIDPEAGHNIIEIGCVEMVRRKLTGNTWHKYLKPDREVEAEAIEVHG
ITNEFLADKPKFAELGAEFIEFVRGAELIIHNAAFDIGFLDTELARNGFAERMEQICTVT
DTLALARKKYPGQRNSLDALCRRYGIDNSHRELHGALLDSEILADVYLALTGGQTTLQLG
QSGQGDDSGDEPIRRVNAAGLTLRVLRASAEELAEHDAFLDLLDKKSDGAVWRRMETEGQ
EA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgagtgctcgacagattattcttgataccgaaacgaccggtattgaccctgaagccggt
cataacatcatcgagatcggttgtgtcgaaatggtgcgccgcaagttaacgggcaatacc
tggcacaaatacctgaagccggatcgtgaagtggaagccgaggcgattgaagttcatggc
atcaccaatgagttcctcgcagacaagccaaaatttgccgagttgggagctgagttcata
gagtttgtgcgcggggccgagctgatcattcataacgcggccttcgatatcggctttctt
gacacagagttggctcgtaacggatttgccgagcgcatggagcagatctgcacggtgacg
gatacgctggcgctggcacggaagaagtacccggggcagcgcaacagtcttgatgccttg
tgtcgccgctacggcatcgataattcgcaccgtgaactgcacggcgcactgctggactcc
gagattctggctgatgtgtatcttgctctgacaggggggcagaccacgttacagcttgga
cagtccgggcagggtgatgactcgggtgatgagcctattcgccgtgtaaacgccgccgga
ctgacacttcgagttctgcgggcgtcagcggaagagcttgccgaacatgacgcttttctg
gatctgcttgacaaaaaaagtgatggtgccgtttggcgtcgtatggagacggaagggcaa
gaggcatga

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