Marinobacterium sediminicola: LN244_09100
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Entry
LN244_09100 CDS
T07998
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msec03032
]
LN244_09100
03036 Chromosome and associated proteins [BR:
msec03036
]
LN244_09100
03400 DNA repair and recombination proteins [BR:
msec03400
]
LN244_09100
DNA replication proteins [BR:
msec03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LN244_09100
Chromosome and associated proteins [BR:
msec03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LN244_09100
DNA repair and recombination proteins [BR:
msec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LN244_09100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
DUF2267
FIMAH
Nup214_FG
Motif
Other DBs
NCBI-ProteinID:
ULG67878
LinkDB
All DBs
Position
complement(1960088..1960363)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIDAIAASADIPKAAAGRALDATLEAVTEALQRGESVALVGFGTFSTKERAARTG
RNPQTGNPIEIAAATLPTFKPGKALKDAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctgaactgattgacgctattgcagcatcagctgacattcctaaagcagct
gctggtcgtgcactggatgcgactctggaagcagtgaccgaagcgctgcagcgtggtgag
tctgttgctctggtcggttttggtaccttctcaaccaaggagcgcgcagcacgtactggt
cgtaacccgcagactggcaacccgatcgaaattgctgctgctaccctgccgactttcaag
ccgggtaaagcgctgaaagacgcagtaaacaagtaa
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