Marinobacterium sediminicola: LN244_09240
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Entry
LN244_09240 CDS
T07998
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
msec
Marinobacterium sediminicola
Pathway
msec00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LN244_09240 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msec01007
]
LN244_09240 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msec03016
]
LN244_09240 (aspS)
03029 Mitochondrial biogenesis [BR:
msec03029
]
LN244_09240 (aspS)
Enzymes [BR:
msec01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LN244_09240 (aspS)
Amino acid related enzymes [BR:
msec01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LN244_09240 (aspS)
Transfer RNA biogenesis [BR:
msec03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LN244_09240 (aspS)
Prokaryotic type
Other AARSs
LN244_09240 (aspS)
Mitochondrial biogenesis [BR:
msec03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LN244_09240 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ULG67904
LinkDB
All DBs
Position
complement(1983836..1985599)
Genome browser
AA seq
587 aa
AA seq
DB search
MRSHYCGDLRADHIGEDITLTGWVHRRRDHGGVIFLDLRDREGIAQVVFDPDREESFNLA
DSVRNEYVVEVRGTVRARPEGTANKEMGTGEIEVLGKELVILNKAETPPFQLDEHQQVGE
DVRLRNRFIDLRRPEIQRKLRFRSKITHNIRNYLEENGFLDIETPILTRATPEGARDYLV
PSRTHEGSFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDLETSF
MDEEGIMGLTEGMIRKLFIELLDVDLGEFPRMPYSEAMQRYGSDKPDLRIPLELVDVADL
LQDIEFKVFAGPAKDPKGRVAALKVPGGAELTRKIIDEYTKFVGIYGAKGLAWIKVNELE
KGAEGLQSPIVKFLGDDVAMKVMERLEAKNGDIVFFGADKATIVNEALGALRIKVGEDMN
LIEREWAPLWVVDFPMFEETSDGGLTALHHPFTAPSCTPAELLEQPEGKLSRAYDMVLNG
TELGGGSVRIHDQEMQRAVFKVLGINDEEAEEKFGFLLNALKFGAPPHGGLAFGLDRLVM
LMTGSSSIREVIAFPKTQSAACLLTDAPGEVSAAQLRELNIKLRKTP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccattattgcggcgacctcagagcagatcatattggagaagacatcaccctg
actggctgggttcaccgccgtcgagatcacggtggtgtcatcttccttgaccttcgtgac
cgtgaaggcattgcccaggttgtattcgacccggaccgtgaagagagcttcaatctggct
gacagcgtgcgtaatgagtacgtggttgaagtccgtggtactgtccgtgcgcgtcctgaa
ggtactgccaacaaggagatgggtaccggcgagatcgaagtactgggcaaagagctcgtt
attctgaacaaggccgaaacccctccgttccagctggatgaacaccagcaggtaggcgaa
gatgttcgtctgcgcaaccgtttcatcgatctgcgtcgccctgaaatccagcgcaagctg
cgtttccgctccaagatcacccacaacatccgtaactatctggaagagaacggctttctc
gatatcgaaacgccgattctgacccgtgcaactccggaaggcgcgcgtgactacctggtg
ccgagccgcacccatgaaggcagtttctttgcgctgccgcagtcgccgcagctgttcaag
cagcttttgatggtgtccggcttcgaccgttactaccagatcgccaagtgcttccgtgac
gaagacctgcgtgccgatcgtcagcccgaatttacccagatcgaccttgaaacctcgttc
atggacgaggaaggcatcatgggtctgaccgaagggatgatccgcaagctctttatcgag
ctgctcgatgtggatctgggtgaattcccgcgcatgccttactcagaagcaatgcagcgt
tacggttccgacaagccggatctgcgcattcctctggagctggtggatgttgctgacctg
ctgcaggatatcgaattcaaggtgttcgctggcccagccaaggatccgaagggccgcgta
gctgccctgaaggtgccgggtggtgctgagttgacccgcaagattatcgatgaatacacc
aagttcgttggtatctacggtgccaaggggttggcttggatcaaggtcaatgaactggag
aaaggtgctgaaggcctgcagtctccaatcgtcaagttcctcggtgacgatgtggccatg
aaagtcatggagcgcctggaagccaagaacggcgatatcgtcttcttcggtgctgacaag
gcaaccatcgtcaatgaggcgttgggtgcgctgcgtatcaaggtcggtgaagacatgaac
ctgattgagcgtgaatgggcgccgctgtgggttgttgacttcccgatgtttgaagagact
tctgatggtggtttgaccgcgctgcatcacccgtttactgcaccgagctgcacacctgct
gaattgctggagcagcctgagggtaaactgtcccgtgcctatgacatggtgctgaacggt
accgagctgggtggtggttctgttcgtatccacgatcaggaaatgcagcgagcagtattc
aaggtgctgggtatcaatgatgaagaagctgaagagaagttcggcttcctgctgaatgca
ctgaaattcggtgcgccgccgcacggtggattggcatttggtctggatcgtctggttatg
ctgatgactggctcatcttccatccgtgaagtgattgcattcccgaaaactcagagtgca
gcgtgcttgctgaccgacgctcctggagaggtcagcgccgcacagttgcgcgaactgaat
atcaagttgcgcaagactccctga
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