Marinobacterium sediminicola: LN244_10550
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Entry
LN244_10550 CDS
T07998
Name
(GenBank) retention module-containing protein
Organism
msec
Marinobacterium sediminicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Motif
Other DBs
NCBI-ProteinID:
ULG68148
LinkDB
All DBs
Position
complement(2286121..2293632)
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AA seq
2503 aa
AA seq
DB search
MSMVIGSVSFVEGQVVAVAPDGTERVLALGDQVMADEVIRTGPDASIEITMMNGEPVALA
SGQSWLAAEAGMATAGLEGGIGVVSVTAGQVVAVAADGSERVLMAGDVIFADEVIRTSPD
GRAEITMESGNAFTLSGGQSWLASADTYTPADQFDTSEATADIAALQQAILAGQDPTELL
EPTAAGAPAAGAPATGNEGADFVQLDRTASETTPEAGYDTIGLDYTVVTPEGEEPFIEVL
PVVSVSVEVETPTDPGDPTDPTDPTDPTDPELPDTPTPEHPVLVSGNSVSILEGSDVENV
KEVTFNLVLDKVFDQDVTVTYKLNGGSAIYGEDWLDGPSPDHTYTVTIPAGESTIPVTVY
IIQDKMDEADTESLGIQLLSAENATINPDSDSGTITIYDDDTTPMAEDDIAVIGPQDNAV
EGNVLANDTDEDGDSPFVVIPDGQQSIQLSHQYGDLTINSDGNYSFVLNQAGVEALQALG
DESLSITFDNAYQVTDGFNNGNYANLIVTINGTNDGPVATANTAAVTEDGPVSDSGNLIT
DDDGNGVDTDLDGDVLSVTAVDGDTSGSIAGTYGTLTWNSTGGYTYTLYTEQENAEAYAA
VQALDSDDTPLTETFTYTLSDGDATDTADLVVTINGTNDGPVATANTAAVTEDGPVSDSG
NLITDDDGNGVDTDLDGDVLSVTAVDGDTSGSIAGTYGTLTWNSTGGYTYTLYTEQENAE
AYAAVQALDSDDTPLTETFTYTLSDGDATDTADLVVTINGTNDGPVATANTAAVTEDGPV
SDSGNLITDDDGNGVDTDLDGDVLSVTAVDGDTSGSIAGTYGTLTWNSTGGYTYTLYTEQ
ENAEAYAAVQALDSDDTPLTETFTYTLSDGDATDTADLVVTINGTNDGPVATANTAAVTE
DGPVSDSGNLITDDDGNGVDTDLDGDVLSVTAVDGDTSGSIAGTYGTLTWNSTGGYTYTL
YTEQENAEAYAAVQALDSDDTPLTETFTYTLSDGDATDTADLVVTINGTNDGPVATANTA
AVTEDGPVSDSGNLITDDDGNGVDTDLDGDVLSVTAVDGDTSGSIAGTYGTLTWNSTGGY
TYTLYTEQENAEAYAAVQALDSDDTPLTETFTYTLSDGDATDTADLVVTINGTNDGPVAT
ANTAAVTEDGPVSDSGNLITDDDGNGVDTDLDGDVLSVTAVDGDTSGSIAGTYGTLTWNS
TGGYTYTLYSEQENAEAYAAVQALDSDDTPLTETFTYTLSDGDATDTADLVVTINGTNDG
PVATANTAAVTEDGPVSDSGNLITDDDGNGVDTDLDGDVLSVTAVDGDTSGSIAGTYGTL
TWNSTGGYTYTLYTEQENAEAYAAVQALDSDDTPLTETFTYTLSDGDATDTADLVVTING
TNDGPVATANTAAVTEDGPVSDSGNLITDDDGNGVDTDLDGDVLSVTAVDGDTSGSIAGT
YGTLTWNSTGGYTYTLYTEQENAEAYAAVQALDSDDTPLTETFTYTLSDGDATDTADLVV
TINGTNDGPVATANTAAVTEDGPVSDSGNLITDDDGNGVDTDLDGDVLSVTAVDGDTSGS
IAGTYGTLTWNSTGGYTYTLYTEQENAEAYAAVQALDSDDTPLTETFTYTLSDGDATDTA
DLVVTINGTNDGPVATANTAAVTEDGPVSDSGNLITDDDGNGVDTDLDGDVLSVTAVDGD
TSGSIAGTYGTLTWNSTGGYTYTLYTEQENAEAYAAVQALDSDDTPLTETFTYTLSDGDA
TDTADLVVTINGTNDGPVATANTAAVTEDGPVSDSGNLITDDDGNGVDTDLDGDVLSVTA
VDGDTSGSIAGTYGTLTWNSTGGYTYTLYTEQENAEAYAAVQALDSDDTPLTETFTYTLS
DGDATDTADLVVTINGTNDTPTLTIQVGDSEVQESGLLSGSSPSEADRTDSGTITLNDTD
GLDDLDSVRFTVSSVETVFTMDQLEGIDASDAGTYLTFDGVHGTITLTGYSNGVISYTYE
LTEATTDVVNVAETDGFLVAVSDDGSTFSTDESVVINIVDDLPELTVESISVNRTSGVTS
GDITYSSGADTIEFVDDAVTGLVWTNMPAEYSFGLKTGTTDTYEATYLDGGQTKTFFEVT
VNADSTYSFNLVNPLPSFTTDSGDLFSAIGTPVDTDNDGDADTATIDSAVFNGVFSVVIT
GKGSGLDYGDAKLHKSSTDMGVNGNTLQSNKGDSIKFDIQQQPGYQNATLKSFTVVCATQ
GSLAVGDQVVLTITYLTGQSEQVLHTVTDADLNTAGDYEITLAIDGVVGTSTGLIVDYVE
IAPAVPNSGNTTMKIVGVSMEYTESIDPSDMALEFDMTAKDADNDVDVGSFTVDLLSGTA
GNDTIVSGNSDDTLSGNDGNDTLIAGGGNDILIGGEGDDILIGGLGSDSLSGGLGADSFV
WAAGDADGGTDTITDFSITESDVLDLSDLLDPDGIYEINSNNLSAYLSANFDSNTGETTI
QVFSGGNAGAADATPDQVIIVNGDLESNLTTLVNNGTIVVDNS
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggtaatcggttcagtttcattcgtagaaggacaagtggttgcagtagcgccg
gacggtaccgagcgtgtgctggcgcttggtgaccaggtaatggcagatgaagttatccgc
acagggcctgatgcaagcatcgaaattaccatgatgaatggcgaaccggttgctctggcg
tcaggccaaagctggctggcagctgaagccggaatggcaacggctggattggaaggtggt
attggtgtggtatctgtcactgccggacaggtggttgccgtggcagcagatggcagtgag
cgtgtgctcatggcgggtgatgtgatttttgccgatgaagtgattcgcacttcgcctgat
ggtcgagccgaaattaccatggaaagcggcaacgcgtttaccctctccggtggtcaaagc
tggttggccagcgctgatacctacactccagcagatcagtttgataccagtgaggcaacg
gccgacatcgcagcgctgcagcaggcaattcttgccgggcaggacccgaccgagcttctt
gagcctactgctgctggtgcacctgcagctggagcacctgcgacgggtaacgaaggggct
gattttgttcagctggaccggactgcaagtgagactacacctgaagcaggctatgacacc
attgggctggactacacagttgtgacgcctgaaggtgaggaaccctttattgaagtactg
ccggtcgtcagcgtctctgttgaagtggaaacaccgactgatcccggtgaccccacggat
ccgaccgatcctactgatccgaccgatccagaacttccggacaccccgacccccgagcat
ccggttctggtgagcggtaacagtgtcagcattctggaaggttctgacgtcgagaatgtc
aaggaagtgactttcaatctcgtactggacaaggtatttgatcaggatgttactgtcact
tacaagctcaatggcggtagcgccatctacggtgaagactggctggatggcccaagtccg
gaccacacctacaccgtcacgattccggccggtgagtcaactatccctgtaacggtatac
atcatccaggacaaaatggatgaagctgataccgagtcgttgggcatccagttgctgagt
gccgaaaatgcgacaatcaaccctgattccgattccggcaccatcactatttacgatgat
gacaccacgccgatggcagaggatgacattgcagttattgggcctcaggataatgccgtc
gaaggtaatgtactggcaaatgataccgacgaagatggtgactcccccttcgttgtaatt
ccagacggtcagcagagcattcagttgagtcatcaatatggcgatctgaccattaatagt
gatggtaactattcgtttgtgctgaatcaggcgggtgtagaggcgctgcaagcactcggt
gatgagtctttaagcatcacctttgataacgcatatcaagttactgatggcttcaacaat
ggtaattatgcaaaccttatagttactatcaacggcaccaacgacggtccggtggcaacc
gcgaacacggccgccgtgaccgaagacggcccggtcagtgacagtggcaacctgatcacc
gatgatgacggcaatggcgtggatacagatctggatggcgacgtcctgagcgtgaccgcc
gtggacggtgacaccagtggcagcatcgcgggtacctacggcaccctgacctggaacagc
accggcggctacacctacacgctgtacaccgaacaggaaaacgccgaggcctatgcagcg
gtgcaggcgctggacagcgacgacacgccgctgaccgagacctttacctacacgctgagt
gacggtgacgccaccgacacggcggatctggtggtgaccatcaacggcaccaacgacggt
ccggtggcgaccgcgaacacggccgccgtgaccgaagacggcccggtcagtgacagtggc
aacctgatcaccgatgatgacggcaatggcgtggatacggatctggacggcgacgtcctg
agcgtgaccgccgtggacggtgacaccagtggcagcatcgcgggtacctacggcaccttg
acctggaacagcaccggcggctacacctacacgctgtacaccgaacaggaaaacgccgag
gcctatgcggcggtccaggcattggacagcgacgacacgccgctgaccgagaccttcacc
tatacgctgagcgacggtgacgccaccgacacggcggatctggtggtgaccatcaacggc
accaacgacggcccggtggcgaccgcgaacacggccgccgtgaccgaagacggcccggtc
agtgacagtggcaacctgatcaccgatgatgacggcaatggcgtggatacggatctggac
ggcgacgtcctgagcgtgaccgccgtggacggtgacaccagtggcagcatcgcgggtacc
tacggcaccctgacctggaacagcaccggcggctacacctacacgctgtacaccgaacag
gaaaacgccgaggcctatgcagcggtgcaggcgctggacagcgacgacacgccgctgacc
gagaccttcacctatacgctgagcgacggtgacgccaccgacacggcggatctggtggtg
accatcaacggcaccaacgacggcccggtggcgaccgcgaacacggccgccgtgaccgaa
gacggcccggtcagtgacagtggcaacctgatcaccgatgatgacggcaatggcgtggat
acggatctggacggcgacgtcctgagcgtgaccgccgtggacggtgacaccagtggcagc
atcgcgggtacctacggcaccctgacctggaacagcaccggcggctacacctacacgctg
tacaccgaacaggaaaacgccgaggcctatgcagcggtgcaggcgctggacagcgacgac
acgccgctgaccgagaccttcacctatacgctgagcgacggtgacgccaccgacacggcg
gatctggtggtgaccatcaacggcaccaacgacggcccggtggcgaccgcgaacacggcc
gccgtgaccgaagacggcccggtcagtgacagtggcaacctgatcaccgatgatgacggc
aatggcgtggatacggatctggacggcgacgtcctgagcgtgaccgccgtggacggtgac
accagtggcagcatcgcgggtacctacggcaccctgacctggaacagcaccggcggctac
acctacacgctgtacaccgaacaggaaaacgccgaggcctatgcagcggtccaggcattg
gacagcgacgacacgccgctgaccgagaccttcacctatacgctgagcgacggtgacgcc
accgacacggcggatctggtggtgaccatcaacggcaccaacgacggcccggtggcgacc
gcgaacacggccgccgtgaccgaagacggcccggtcagtgacagtggcaacctgatcacc
gatgatgacggcaatggcgtggatacggatctggacggcgacgtcctgagcgtgaccgcc
gtggacggtgacaccagtggcagcatcgcgggtacctacggcaccctgacctggaacagc
accggcggctacacctacacgctgtactccgaacaggaaaacgccgaggcctatgcggcg
gtccaggcattggacagcgacgacacgccgctgaccgagaccttcacctatacgctgagc
gacggtgacgccaccgacacggcggatctggtggtgaccatcaacggcaccaacgacggc
ccggtggcgaccgcgaacacggccgccgtgaccgaagacggcccggtcagtgacagtggc
aacctgatcaccgatgatgacggcaatggcgtggatacggatctggacggcgacgtcctg
agcgtgaccgccgtggacggtgacaccagtggcagcatcgcgggtacctacggcaccctg
acctggaacagcaccggcggctacacctacacgctgtacaccgaacaggaaaacgccgag
gcctatgcagcggtgcaggcgctggacagcgacgacacgccgctgaccgagacctttacc
tacacgctgagcgacggtgacgccaccgacacggcggatctggtggtgaccatcaacggc
accaacgacggcccggtggcgaccgcgaacacggccgccgtgaccgaagacggcccggtc
agtgacagtggcaacctgatcaccgatgatgacggcaatggcgtggatacggatctggat
ggcgacgtcctgagcgtgaccgccgtggacggtgacaccagtggcagcatcgcgggtacc
tacggcaccctgacctggaacagcaccggcggctacacctacacgctgtacaccgaacag
gaaaacgccgaggcctatgcggcggtccaggcattggacagcgacgacacgccgctgacc
gagaccttcacctatacgctgagcgacggtgacgccaccgacacggcggatctggtggtg
accatcaacggcaccaacgacggcccggtggcgaccgcgaacacggccgccgtgaccgaa
gacggcccggtcagtgacagtggcaacctgatcaccgatgatgacggcaatggcgtggat
acggatctggacggcgacgtcctgagcgtgaccgccgtggacggtgacaccagtggcagc
atcgcgggtacctacggcaccctgacctggaacagcaccggcggctacacctacacgctg
tacaccgaacaggaaaacgccgaggcctatgcagcggtccaggcattggacagcgacgac
acgccgctgaccgagaccttcacctatacgctgagcgacggtgacgccaccgacacggcg
gatctggtggtgaccatcaacggcaccaacgacggcccggtggcgaccgcgaacacggcc
gccgtgaccgaagacggcccggtcagtgacagtggcaacctgatcaccgatgatgacggc
aatggcgtggatacggatctggacggcgacgtcctgagcgtgaccgccgtggacggtgac
accagtggcagcatcgcgggtacctacggcaccctgacctggaacagcaccggcggctac
acctacacgctgtacaccgaacaggaaaacgccgaggcctatgcagcggtccaggcattg
gacagcgacgacacgccgctgaccgagaccttcacctatacgctgagcgacggtgacgcc
accgacacggcggatctggtggtgaccatcaacggcaccaacgacggcccggtggcgacc
gcgaacacggccgccgtgaccgaagacggcccggtcagtgacagtggcaacctgatcacc
gatgatgacggcaatggcgtggatacggatctggacggcgacgtcctgagcgtgaccgcc
gtggacggtgacaccagtggcagcatcgcgggtacctacggcaccctgacctggaacagc
accggcggctacacctacacgctgtacaccgaacaggaaaacgccgaggcctatgcagcg
gtgcaggcgctggacagcgacgacacgccgctgactgagaccttcacctatacgctgagt
gacggtgacgccaccgacacggcggatctggtggtgaccatcaatggcactaatgatacc
ccaacattaaccattcaggtcggtgacagtgaggtacaggaatctggtctactgtctggc
tcgagtccaagtgaagctgaccgtaccgatagcggtactatcaccctcaatgatacagat
gggcttgatgaccttgacagcgtgcgcttcacagttagcagcgttgaaactgtattcact
atggatcagttggaaggcatcgatgccagcgatgctggtacttatctgacctttgatgga
gtgcatggcactattaccctgacgggctacagcaacggcgtgatcagctacacctacgag
ctgacagaagcgaccacagatgtggtaaatgtggctgaaaccgacggtttcctggttgcg
gtatcagatgacggcagcaccttctccactgatgagtcggttgtgattaacatcgttgat
gacttgccggaattaactgtcgagtcaatatccgttaatagaacctctggtgtcactagt
ggtgacattacctattcaagtggtgccgataccattgagtttgttgatgatgctgtcacc
ggtctggtgtggacgaatatgccggctgagtattcatttggcttgaagactggcacaact
gatacctatgaagcgacgtatttggacggcggccagaccaagaccttctttgaggtcacc
gttaatgctgatagcacatacagctttaacctggtgaatccgctgccttcgtttacaacg
gattctggagacctcttcagtgcaataggaacacctgtcgacacagacaatgacggtgat
gctgatacggctacgattgatagcgcggtatttaatggggtcttttccgttgtcatcacc
ggtaaaggtagcgggctggattatggtgacgccaaactgcataaatcttccaccgacatg
ggtgtcaacgggaataccttgcagtccaacaaaggcgatagcatcaaatttgatatccag
cagcagccgggttatcagaatgcaaccttgaagtcgttcacggttgtgtgcgctactcag
ggaagcctggcggtaggtgatcaggtcgttttgactattacttatctgactgggcaatca
gagcaggtgctacatacggtcactgatgccgatctcaatacagcgggtgattatgaaatt
accttggctatcgatggggtagtcggtactagcaccggattgatcgtagactatgtggaa
atcgcccctgcagtgccaaatagtggtaacacaaccatgaagattgtcggtgtttcgatg
gaatacacagagtccattgatccatccgacatggcgcttgagttcgatatgacagccaaa
gatgccgacaatgatgtggatgtgggttcgtttactgtggacctgctgtcgggtacggcc
ggaaatgacaccattgtttcaggtaacagcgatgacacgctgagcgggaatgatggtaac
gatactcttattgcggggggcggtaatgacatcctcatcggtggcgaaggggatgatatt
ttgattggcggcctgggaagtgacagcctgtccggtggtctgggggctgatagctttgta
tgggctgccggggatgctgatggtggtacggatactattacggacttcagcattacggaa
tcggatgtgctggatctttcagatctgctggacccagacggtatttatgaaatcaacagc
aataatcttagtgcttatctgagcgccaacttcgacagcaatactggggaaaccactatc
caggtcttctctggaggcaatgctggagcggcggatgctactccagaccaggtcatcatc
gttaatggcgatttggaaagtaatctgaccactcttgtcaataacggcaccatcgtggtc
gacaacagctaa
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