Marinobacterium sediminicola: LN244_10605
Help
Entry
LN244_10605 CDS
T07998
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msec03400
]
LN244_10605
Enzymes [BR:
msec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LN244_10605
DNA repair and recombination proteins [BR:
msec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LN244_10605
Prokaryotic type
LN244_10605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF4211
Phage_fiber_2
Motif
Other DBs
NCBI-ProteinID:
ULG68155
LinkDB
All DBs
Position
2303896..2305410
Genome browser
AA seq
504 aa
AA seq
DB search
MINSSQLQLVWLKRDLRLADHPALHEAANQGPVLVLFVIEPEYWRLPDHSARHWHFCRDS
LLDLQSSLAQQHHSLLIRQGSVNDVLTELYRLYGRFTLWSSEETGNDWTYRRDLKIDAWC
RSHHIDWQQRPQNGVIRRLRNRDHWTDHWQRRMQAQPLPIPQLRSPSRLPPLMSIPEVPD
GCDFPAFMPQQPGGRTAALRCLNTFLTERGRDYRFAMSSPNTAYAACSRLSPHLCWGTLS
VREVYQAANKALEDAETTGWKRSLRSFISRLYWHCHFMQKLEDRPSLEWEPIHPLFSDLD
RHLDKERLERWSHGLTGWPFVDACMRALNARGWINFRMRAMLTSVASYHLWLPWQTSGQV
LARAFIDYEPGIHWPQIQMQSGTTGINAIRIYNPLKQGLDLDSDGHFIRRWVPELASAPL
SALHEPRMLRHPDYPRPMADLTIAARLAREKMAAIHHHPRFDELSRAVYQQLGSRKRNGR
AGRRSRRHSDYAATTSTPQLSLWN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgataaattcttctcagctgcagcttgtctggcttaaacgagacctgcgccttgccgac
catccggccttgcacgaagctgcaaatcaaggacctgttctcgttctgttcgtgatcgaa
ccggagtattggcgcctgcccgatcactctgcacgccattggcatttttgccgtgacagt
cttcttgatctgcaaagcagcctggcacaacagcaccattccctattgattcgccagggc
tcggtgaacgatgtactgacggagctctatcgtttatatggccgcttcacgctctggtca
tctgaagaaaccggtaacgactggacctaccggcgagacctcaagattgatgcctggtgc
cgcagccatcacattgactggcaacaacgcccacagaatggcgtgatacgacgactgcga
aaccgcgatcactggactgaccactggcaacgacgcatgcaggcccagccgctgcccatc
ccgcagttgcgctcaccgtcccgactgccgcccttgatgagcattcccgaggtgcctgac
ggctgtgatttccccgcctttatgcctcagcaaccaggcgggcgcaccgctgccctgcgc
tgcctgaacacgttcctgaccgagcgaggacgtgactatcgtttcgccatgtccagtccc
aacaccgcttatgccgcctgctcacgactatccccccacctttgctggggaactctgtcg
gtacgcgaggtttaccaggccgccaataaggcactggaagatgcggagacaaccggttgg
aaacggtcattgcgcagtttcatcagccgcctgtactggcactgtcacttcatgcaaaag
ctggaagatcgcccttcgctggagtgggagcccattcatccgctcttttccgacctggac
cggcacctggacaaggagcgactggagcgctggagccatgggctgacggggtggccattc
gtggacgcctgcatgcgcgcacttaatgctcgcggctggatcaactttcgcatgcgcgcc
atgctgacttcggtggccagttatcatctttggctgccctggcaaacgagcggacaggtg
ctggctcgagccttcatcgactacgagcccggcatacactggccgcagattcagatgcag
tccggtaccaccggcattaatgccatccgcatctacaacccgctcaagcaggggctggac
ctggattcggacggtcactttatccgtcgttgggtacctgaactggccagcgcaccgctg
tctgcgctgcatgagccgcgcatgctcagacacccggactacccgcggccgatggcagac
ctgacgattgccgcccgcctcgcccgagaaaaaatggccgccattcaccaccatccccgt
tttgacgagctgagccgggcggtatatcagcaattggggagtcggaaacgaaacggtcgc
gcaggtcgtcgaagtcgccgtcattctgactacgcagcgacgacctccacccctcagctg
agtttatggaattga
DBGET
integrated database retrieval system
