Marinobacterium sediminicola: LN244_11070
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Entry
LN244_11070 CDS
T07998
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
msec
Marinobacterium sediminicola
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msec03400
]
LN244_11070
Enzymes [BR:
msec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LN244_11070
DNA repair and recombination proteins [BR:
msec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LN244_11070
Prokaryotic type
LN244_11070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ULG68239
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All DBs
Position
complement(2402929..2404347)
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AA seq
472 aa
AA seq
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MQLVWFRNDLRLADNPALSAACAAGERVKALVCLTPEQWTEHNESEARQRYWHARLDWLE
QALLKGGIELIRLPLQRFSDCPDAILQVAQQQGASKLHFNYEYPLNERNRDRLTCERLES
EGIAVQGHHGDLIVPPGQVVTGQGTAFKVFTPFSKAWLRCLLRLEHEPLPSPVQGDECAR
DQKRDTDKPYRAGKRIQRLGSRYAPEPDTGYPVNDDDLHEVLQRFVHEQEPDYQRLRDFP
ARHATSGLSPALTIGALSARQCLARLKQAHDGDGWQQSTWLNELVWREFYRHLLVSFPEL
NRLTPFRPDVEARITWLDNEKAFEAWKAGETGFPIVDAAMKQLLATGWMHNRLRMIVASF
LTKLLRIDWRRGEAFFMSKLIDGDFASNLGGWQWSASVGADAAPYFRIFNPQLQSEKFDP
NGEFIAEWLPELRHLEPKARHKPGAGQEYGRPGPIIDYKQARQSALDDYNGG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggtttggtttcgtaatgacctgagactggcagacaatccggccctcagtgca
gcctgtgcggcgggggagcgggtcaaggcgctggtgtgcctgacaccggaacagtggact
gagcataacgagtccgaggctcgacagaggtattggcatgctcgccttgactggctggag
caggcgttgctgaaaggcggtattgagctgatccgtttgccattgcaacgcttttccgat
tgccctgacgccatcctgcaggtggcacagcagcagggagcctcaaagttgcatttcaac
tatgaatacccattgaacgagcgcaaccgagaccgtctgacctgcgaacggctggagagc
gaggggattgccgttcaaggtcatcatggcgatctgattgtgcctcccgggcaagtcgtc
accgggcagggaacagcattcaaggtgtttacccctttcagtaaggcatggctacgctgt
ttgttaaggctggaacatgagcctttgccttcaccggttcagggggatgaatgcgcccgt
gatcagaaaagagacaccgacaagccgtatcgagccggtaaaagaattcagcgtttaggg
tcaaggtacgcaccagagccggatacgggttacccggtcaatgacgatgacctccatgaa
gtgctgcagcgttttgtccatgagcaggagcctgactatcagcggttgcgtgactttcct
gctcgccatgctacctccggcctttcaccggcgctgaccattggtgccctgtcggcgagg
cagtgtctggcgagactcaagcaggctcatgacggcgacggctggcaacagagtacctgg
ttgaatgagttggtgtggcgagagttttatcgccatctgctggtgagctttcctgagctc
aacaggctgacccctttccgacccgatgtggaagcccggatcacctggttggacaacgaa
aaggcttttgaagcctggaaggcaggggaaaccggctttccaattgttgatgcagcgatg
aagcagttattggccaccggctggatgcataaccgattgcgcatgattgtggcgtcgttc
ctcaccaaactgttgcgcatcgactggcggcgtggagaagcctttttcatgtcaaagctg
atcgatggggacttcgcgtccaatctggggggctggcagtggagcgcttcagtcggtgcg
gatgcggcgccttacttccgtatctttaatccacagttgcagagtgaaaagttcgacccc
aatggcgagtttatcgccgagtggttgcctgaacttcgccatctggaacccaaggcacgg
cataaaccgggcgcgggacaagaatacgggcgtccggggccaatcatcgactataaacag
gcgcgtcagtcggcactggatgactacaacggcggctaa
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