Marinobacterium sediminicola: LN244_12930
Help
Entry
LN244_12930 CDS
T07998
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
msec
Marinobacterium sediminicola
Pathway
msec02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LN244_12930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msec02000
]
LN244_12930
02044 Secretion system [BR:
msec02044
]
LN244_12930
Transporters [BR:
msec02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LN244_12930
Secretion system [BR:
msec02044
]
Type I secretion system
Adhesin protein transporter
LN244_12930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_29
MukF_C
Motif
Other DBs
NCBI-ProteinID:
ULG68592
LinkDB
All DBs
Position
complement(2844052..2846172)
Genome browser
AA seq
706 aa
AA seq
DB search
MDVEKDPLLQCLVLLTEQNNRPRSPQVLTEGLPLVDGRLTPKLFLRAAARGGFAAKLAQR
PLGELSNLLLPAVLLLEGEKACILQRLDFDKGEADVLQPESGGVAHLNLDELEQAYTGHV
LFMRPEYQFGDTNSSELNDRSGHWFWSTLWRSARIYRDVLLASVLINLFVLANPLFVMNV
YDRVVPNHAVETLWVLAIGVLVVYLFDFGLKMLRSYFIEVAGKKSDVLLSARLFEKVMGL
RYDAMPSSVGAFASNLREFESIRNFLSSTTNTVLIDIPFMLLFLVVISWIGGPLVLVPAL
AIPMILIYALAIRPSLRRSIERTFSSTAQKNGTLVESLTAMETLKTQRAASPMQARWEEA
VGYIARWGLRSRMLSSSVVSFAGLVQQLASVLLVIGGVYMIMEQNLSMGGLIACVILSGR
AIAPLGQVASLVANYEQSLKALKTLDEIMALPDEHEPDRRYLHRPDLKGGIEFKEVDFTY
PGTDYGALKGISFRLQPGEKVALIGRIGSGKSSIQKLLLGLYKPSRGAIAVDGIDLNQID
PSDLRRSVGYVPQDVMLFAGSVRDNITIGLPKASDEQILQAARLSGVESFVNQHPLGFDM
PVGERGSALSGGQRQAVALARALLHDPSTLILDEPSNSMDNASEDYLRRQLKDYAEHKTV
LMVTHKMSLLDLVDRLIVIDGGKVVADGPKDSVLEALKQGRLQVRR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgagaaggaccctttactgcaatgtctggtattgctgacagagcagaataat
cgcccccgttcaccacaggttttgacggaggggttgcctcttgtcgatggtcgtctcaca
cccaagctgttcctgagggcagccgcacgcggtggttttgctgccaagctcgcacagcgc
cccctgggtgaattatccaatctgcttttgccggcggtattgctgcttgagggcgaaaaa
gcctgcattctacagcgactggacttcgacaagggagaagccgatgtccttcagcccgag
agtggtggtgtcgcacacctgaatctcgatgaactcgagcaggcctatactggccacgtt
ctgttcatgcggcctgaataccagtttggggataccaacagcagtgagctgaatgatcgg
agcggtcactggttctggagtacgctttggcgttcggcacgcatctatcgtgacgttttg
ctggcctcggtactgatcaacctgttcgtgttggccaaccccctgtttgtcatgaatgtc
tacgaccgcgtcgtgcccaaccatgcggtagaaaccctttgggtgctggcgatcggtgtg
ctggtggtttacctgtttgatttcggcctgaaaatgctgcgttcgtattttatcgaagtg
gcgggcaagaaatcggatgtgcttctgtcggcgcgcctgttcgagaaggtaatggggctg
cgctatgacgccatgccgagttcggttggtgcctttgccagtaacctgcgcgagttcgag
agtattcgcaacttcctcagctccacgaccaataccgtgctgatcgacattccgttcatg
ctgctgtttctggttgtgatcagctggattggcggccctctggtgctggtgcctgctctg
gccattccgatgattctgatctacgcactggcgatccggccaagcctgcgccgatcaatc
gaacgtaccttcagttcgacggcgcagaaaaatggcaccttggtggaatcactgacagcc
atggagaccctgaagacacagcgggcggccagtcccatgcaggcacgctgggaagaagct
gtgggttatatcgcacgctggggactgaggtcgaggatgttgtcctcgtcggtggtcagc
tttgccgggctggtgcaacaactcgcatcggtcctgttggtgatcggcggggtctacatg
atcatggagcagaacctgtccatgggggggctgatcgcctgtgtcattctgagtggtcgc
gccatcgctcccttgggtcaggtggccagcctggtggcaaactacgagcagtcactgaaa
gcattgaaaacgctcgatgagatcatggcgcttcccgacgaacatgagcctgaccggcgc
tacctgcaccgtcccgatctaaagggggggatcgaattcaaggaggtcgactttacctat
cctggaaccgattacggtgcgctcaagggcatcagtttccgtctccagccgggggaaaag
gtagcgttgatcggccgtatagggtctggcaagagcagtattcagaaactgctgctgggt
ctctacaagcccagcaggggggctattgccgttgatggcatcgacctgaatcagatcgac
ccttctgacctgcgccgcagtgtcggctatgttccccaggatgtgatgctgtttgccggc
agtgtccgtgacaacattaccattggcttgccaaaggccagtgacgagcagattcttcag
gccgcgcgtctttcgggggttgagtcattcgtcaaccagcatccgttgggttttgacatg
ccggtaggggagcgtggcagtgcgctgtcaggcggtcagcgccaggcggtggcgctggca
agggcgttgttgcatgatccgtccaccctgatactggatgaacccagtaactccatggat
aacgcttccgaggattatctgcgccgccagctcaaggattatgctgaacacaaaaccgtg
ttgatggttacgcacaagatgtcgctgctggatttggttgatcgtctgatcgtcatcgac
ggtggcaaggtggtggctgacgggcccaaggatagcgtgcttgaggcgctgaaacaggga
cgattgcaggtgaggcgctag
DBGET
integrated database retrieval system
