Marinobacterium sediminicola: LN244_13240
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Entry
LN244_13240 CDS
T07998
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msec
Marinobacterium sediminicola
Pathway
msec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LN244_13240 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msec03019
]
LN244_13240 (groL)
03110 Chaperones and folding catalysts [BR:
msec03110
]
LN244_13240 (groL)
03029 Mitochondrial biogenesis [BR:
msec03029
]
LN244_13240 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msec04147
]
LN244_13240 (groL)
Enzymes [BR:
msec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LN244_13240 (groL)
Messenger RNA biogenesis [BR:
msec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LN244_13240 (groL)
Chaperones and folding catalysts [BR:
msec03110
]
Heat shock proteins
HSP60 / Chaperonin
LN244_13240 (groL)
Mitochondrial biogenesis [BR:
msec03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LN244_13240 (groL)
Exosome [BR:
msec04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LN244_13240 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LN244_13240 (groL)
Exosomal proteins of breast cancer cells
LN244_13240 (groL)
Exosomal proteins of colorectal cancer cells
LN244_13240 (groL)
Exosomal proteins of bladder cancer cells
LN244_13240 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
MGAT2
Motif
Other DBs
NCBI-ProteinID:
ULG68649
LinkDB
All DBs
Position
complement(2910136..2911782)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVRFGDDARQRMLQGVNILADAVKTTLGPKGRNVVLDKAFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASKANDVAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DKAAAAVVQQLAEMSVPCEDSKAIAQVGTISANSDVAVGSIIAEAMEKVGKDGVITVEEG
SGFDNELDVVEGMQFDRGYLSPYFINNQDTMTCELEDPFILLVDKKITNIRELLPALEQV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVSAVKAPGFGDRRKAMLQDIAIISGGQV
ISEEIGLSLDTVTLEQLGTAKRVNITKENTVIVDGAGAKADIDARVQQIRAQIEETSSDY
DREKLQERVAKLAGGVAVIKIGAATEVEMKEKKARVDDALHATRAAVEEGVVPGGGVALI
RALSKVEGLQGDNHDQTIGIQLALRAMEAPLRQIVANAGGEGSVVVNKVRAGEGAFGFNA
GTEEYGDMMEMGIIDPAKVTRSALQAAASIAGLMITTEAMVADHPEENAGGMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtacgttttggtgatgatgctcgtcagcgcatgctgcagggcgtg
aatattctggcagatgcggttaagaccactctgggcccgaaaggccgcaacgtggtactg
gacaaggctttcggtgcgccgaccgtgaccaaagacggtgtttccgtcgccaaggaaatc
gaactgaaagacaagttcgaaaacatgggcgcacagatggtcaaggaagtggcttccaag
gccaacgatgttgcgggtgacggtactaccactgcgaccgttctggcgcaggcgatcgtg
aacgaaggcctgaagtccgtagcggctggcatgaacccgatggacctgaagcgcggtatc
gacaaggcggcggctgcggtcgttcagcagctggccgagatgtctgttccctgtgaagat
tccaaggccatcgctcaggttggtaccatctctgccaactctgacgttgctgtcggcagc
atcatcgccgaagcgatggaaaaggtcggcaaggatggtgttatcactgttgaagaaggt
tccggtttcgataacgagctggacgttgtagaaggtatgcagttcgaccgcggttacctg
tctccgtacttcatcaacaaccaggacaccatgacctgcgagctggaagacccgttcatc
ctgctggtcgacaagaaaatcaccaacatccgtgagctgctgccggctctggagcaggtt
gccaaggcatcccgtccgctgctgatcatcgctgaagacgttgaaggtgaagcgctggca
actctggtggtcaacaacatgcgcggcatcgtcaaggtgtctgccgtgaaggcaccgggc
ttcggtgaccgtcgcaaggcgatgctgcaggatatcgcgatcatcagcggtggtcaggta
atctctgaagagatcggcctgagcctggataccgtgactctggagcagctgggtactgcc
aagcgtgtcaacatcaccaaggaaaacaccgtgattgttgatggtgccggtgccaaggct
gacatcgatgcccgtgttcagcagatccgtgcgcagatcgaagaaacctcttccgactac
gaccgcgagaagctgcaggaacgtgttgccaagctggcgggcggtgttgccgtgatcaag
atcggtgccgcgaccgaagtcgaaatgaaagagaagaaagcccgagttgacgatgcgctg
cacgccactcgcgcagctgttgaagaaggtgtggtaccgggcggcggtgttgctttgatc
cgtgcgctgagcaaggttgaaggcctgcagggcgacaaccacgatcagaccatcggtatc
cagctggccctgcgtgccatggaagctccgctgcgccagatcgtcgccaacgccggtggc
gaaggttccgtggttgtgaacaaggttcgcgcaggtgaaggtgctttcggtttcaacgca
ggtaccgaagagtacggcgacatgatggaaatgggtatcatcgacccggccaaggtaacc
cgttctgcactgcaggcggctgcgtctatcgccggtctgatgatcaccaccgaagccatg
gttgctgatcatccggaagaaaatgcaggcggcatgccggatatgggcggcatgggcggc
atgggtggcatgggcggcatgatgtaa
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integrated database retrieval system
